Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0937 ATGGCCACCACAACTGCCGCCGCCACGTCACACTTTTTCGGCACTCGTATCAGCAACAAACCAACCTCAAACATGGGAAGAGTCCGTGCATTCTTCAACCTCCCCGGCAAATTAAAACCACAACCAAAGAAAAAAGAAGTTAAAAAAGTGAGACAACCAGAAAGTGACGGACTAGTGTGGTTTCCTGGTGCACAGCCACCGGAATGGCTGGACGGATCATATATCGGTGACCGTGGATTTGATCCATTGGGATTCTCGAAACCAGCGGAGTATTTGCAGTTTGAACTTGACTCGCTTGATCAGAATCTGGCTAAGAACCTTGCTGGTGATATAATTGGAACTAGGGTGGAAAGTACGGAGGTTAACCCGACGCCGTTTCAGCCGTACACGGAAGTTTTTGGAATTCAGAGGTTTCGTGAGTGTGAAGTTATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCGCATGGCAAGATGCTGGAAAGGTAGAGCTTGTAGAAGGGTCATCCTACTTTGGATTACCACTTCCATTCTCAATTAGCACATTGATATGGATTGAAGTATTAGTAATTGGCTACATTGAGTTTCAAAGGAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCTGGTGGAAAATTCTTTGATCCTCTTGGTTTGGCCAGTGACCCTGAAGAGAAAGAAAGACTTCAACTAGCAGAGATTAAGCATTCTCGCTTAGCTATGATTGTCTTCCTCATCTTTGCAATCCAAGCTGCTGTTACAGGAAAAGGACCTATTGGTTTCATTGCTACCTTCAACCAGTAA 837 0.4528 MATTTAAATSHFFGTRISNKPTSNMGRVRAFFNLPGKLKPQPKKKEVKKVRQPESDGLVWFPGAQPPEWLDGSYIGDRGFDPLGFSKPAEYLQFELDSLDQNLAKNLAGDIIGTRVESTEVNPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGLPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLAMIVFLIFAIQAAVTGKGPIGFIATFNQ* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0937 278 SUPERFAMILY Chlorophyll a-b binding protein 55 275 - -
Tpr7g0937 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
Tpr7g0937 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 277 IPR001344 GO:0009765|GO:0016020
Tpr7g0937 278 Gene3D Chlorophyll a/b binding protein domain 57 278 - -
Tpr7g0937 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0937 Tpr-Chr7 8586468 8590271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0937 13 275 Chloroplast and Mitochondria Gene Families AT3G08940 69.202 1.23e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0937 K08915 - gmx:100820335 446.817