Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0925 ATGGGAGATGAAATCAAGGAAAAGGTGAAGGAAGGTGAATTACAAAAGCAAATCAAATATAGAGGAGTAAGGGTAAGGCCATGGGGAAAATGTGCGGCAGAGATTCGAGATTCGGCTAGGCATGGAGCTCGAGTTTGGCTTGGTACATTTAATACTGCTGAGGAAGCTGCGAGAGCTTACGATCGTGCTGCTTTTAATATGAGAGGTTCTTCGGCTATTCTTAACTTTCCACATGAACATTTTCCTTCTAAGCCCTCTTCTTCTTCTTCCAATTCAACCTCATCATCTGCAAAGGTTAAATCAAAGCTTGATGAACAAGTTATAGAGTTTGAGTATTTAGATGAAAAATTGTTAGAGGAACTCTTGGACTGTGAGAATACCATCAATCACAACTGGTTCAAGTAG 405 0.4025 MGDEIKEKVKEGELQKQIKYRGVRVRPWGKCAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFNMRGSSAILNFPHEHFPSKPSSSSSNSTSSSAKVKSKLDEQVIEFEYLDEKLLEELLDCENTINHNWFK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0925 134 PANTHER DNA-BINDING DOMAIN 12 92 IPR044808 GO:0003700|GO:0009873
Tpr7g0925 134 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 MobiDBLite consensus disorder prediction 81 101 - -
Tpr7g0925 134 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Tpr7g0925 134 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 MobiDBLite consensus disorder prediction 78 101 - -
Tpr7g0925 134 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Tpr7g0925 134 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Tpr7g0925 134 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 12 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0925 Tpr-Chr7 8416617 8417270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0925 16 125 AP2-EREBP Transcription Factor Family AT3G23230 61.667 1.21e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g0925 AP2 7.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0925 - - mtr:MTR_7g096700 178.333