Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0917 ATGATGACTGGTTCTGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGTTGTGTTTTTGCACCTTACTTTTGTCATGAACAAGGTGCTACTCATTTTGCAGCTATTCATAAGGTCTTTGGTGCAAGTAATGTCTCAAAACTTCTTGCACATCTCCCTGTGACTGATCGTTGCGAAGCTGCGGTTACAATTTCTTATGAAGCTCAAGCTAGACTACAAGATCCAATCTATGGATGTGTTGCTCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAAGCACAACTAGCTTATATGAAGGAAGAAGCAGCTCAAAGGTGTCTCAATACCTCAATCATTGAAAACCCTAATGAGAAAAACTTTGTAAAACCTAGTAATAACATTCTCCCTCAAGATCTTCAAATCCAAATGGAAAATAATTCCTACATGAGTCCTCAATTTCTTCCCAACTTATCCTCATCCACTACTAATCTCTCAACTACACATTATTATAATGGGAATAGTACCACTTTCATGGACCTAAACCCTATAATTGGAAACTATGAAAATTCAGGAACTTTAGAAGAAAGCATCTCATCATTTTCTAACTTTGATGACAGATGTAATAACTCAATGTGGAACTTTCATGAAGTGCATAACCTTCAGTAA 666 0.3664 MMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYMKEEAAQRCLNTSIIENPNEKNFVKPSNNILPQDLQIQMENNSYMSPQFLPNLSSSTTNLSTTHYYNGNSTTFMDLNPIIGNYENSGTLEESISSFSNFDDRCNNSMWNFHEVHNLQ* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0917 221 Coils Coil 88 108 - -
Tpr7g0917 221 ProSiteProfiles LOB domain profile. 7 109 IPR004883 -
Tpr7g0917 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 220 - -
Tpr7g0917 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 2 220 - -
Tpr7g0917 221 Pfam Lateral organ boundaries (LOB) domain 8 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0917 Tpr-Chr7 8317956 8319320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0917 2 130 AS2 family AT2G42440 73.282 1.78e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g0917 LOB 7.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0917 K13945 - gmx:100776678 305.064