Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0915 ATGGCTTCAAATGGAACTAGCTCTGGAACTGGTTCTCCTTGTGGAGCATGCAAGTTCCTAAGAAGAAAATGTGCACCTGATTGCATTTTTGCACCTTACTTTTGCTCAGAACAAGGTCCTGCAAGATTTGCAGCTATTCATAAAGTGTTTGGTGCTAGCAATGTTTCTAAGTTGCTTTTGCATATACCAGCTCATGAACGTTGTGAAGCTGTTGTTACTATTGCTTATGAGGCTCAAGCTCGTATTAGAGACCCTGTTTATGGCTGTGTCTCACACATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAGGCACAATTGATTCAAGTGAAATCTCAGCTATCACAAAACATAGACAATAATCAATGGACATGGAATAATAATACTAATAATAATGTTGCTACTACACAACCAATGAATTATCCATTTTGTCCAACTTACATGAATCCTATATCTCCTCAAAGCTCACTAGAGTCATCAATTGATCATAGTAGCAGCATGAATGATGGAATTATGAGCATGCAAGATGTACAAAGTAGTAGAGAAGATTTCTCATTCCAAGCTTGTAATAATTCTAAGAAAAGAATGTCATATAACAATAATAATCATGACTTGGGAGAGTTGCAAGAGATTGCACTTAGGATGATGAGGAATTTTGACTAG 663 0.371 MASNGTSSGTGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHERCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLIQVKSQLSQNIDNNQWTWNNNTNNNVATTQPMNYPFCPTYMNPISPQSSLESSIDHSSSMNDGIMSMQDVQSSREDFSFQACNNSKKRMSYNNNNHDLGELQEIALRMMRNFD* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0915 220 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Tpr7g0915 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 217 - -
Tpr7g0915 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 217 - -
Tpr7g0915 220 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0915 Tpr-Chr7 8295946 8297901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0915 2 218 AS2 family AT2G42430 53.469 2.10e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g0915 LOB 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0915 K13944 - gmx:100801508 308.145