Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0860 ATGAATCAAACACTTGAAGCTTTCCCTCATGGTGAATGGGAATGCTTTCAAAGAATGTTTGCAACTGAAGAACATGATGACTCACCACCACAATTACTTGATCAAACCTCACTTCTGCTAATGGAAGATCATGGCAACTTTGGAGTACAATCCATGTTTGATTCTCACAACAACTATAATTCACAAGAAACTAATCATAGCCACTATTTTGATTATTCTAATCATATGGTAGCTAATAATGGTGACATATCAGAGAATTTTGATCACAGTCAAGTCCAACCTATTGTCTTTCCCGCGAAGCCGTTGAAGGTGAAAAGGATGCTTGATGTGCCAGAATTTCAAGTGCATGCAGAAGATAAGAAAGACAAATGTGTGAATCCAACGAAAAAACCTCATGCTTCAAAAGATCTTCAAAGATGCGTGACGAACACAGAGTCCAAGAAGAGCAAAAAGGTTGATAGAAATGGGAACAAGGCAGAAGAAACAAATGCAAGTGTAGATGGACATAGCTCTAGTGGTTATACCTCAGAGGAGCATAACATGTATGAGGAAATCAGTGGAGGGGCTACTTCAGCATCTAAATCAACTATGGCTCTCAACTCAAATGGGAAAACAAGAGCTAATAGAGGATCAGCCACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGGGAGAAAATAAACGACAGACTAAGAATTCTACAGAATCTTGTACCAAATGGAACAAAGGTTGATATAAGCACAATGCTTGAAGATGCAATCCATTATGTGAAATTTTTGCAGCTCCAAATCAAGCTTCTAAGTTCTGATGATATGTGGATGTATGCTCCAATTGCTTATAATGGACTTGACATTGGAGTCAATTTCAACCAGAAAATTTCTCCACCACCTTGA 894 0.3837 MNQTLEAFPHGEWECFQRMFATEEHDDSPPQLLDQTSLLLMEDHGNFGVQSMFDSHNNYNSQETNHSHYFDYSNHMVANNGDISENFDHSQVQPIVFPAKPLKVKRMLDVPEFQVHAEDKKDKCVNPTKKPHASKDLQRCVTNTESKKSKKVDRNGNKAEETNASVDGHSSSGYTSEEHNMYEEISGGATSASKSTMALNSNGKTRANRGSATDPQSLYARKRREKINDRLRILQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSSDDMWMYAPIAYNGLDIGVNFNQKISPPP* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0860 297 MobiDBLite consensus disorder prediction 201 222 - -
Tpr7g0860 297 MobiDBLite consensus disorder prediction 119 176 - -
Tpr7g0860 297 Pfam Helix-loop-helix DNA-binding domain 221 261 IPR011598 GO:0046983
Tpr7g0860 297 Gene3D - 213 276 IPR036638 GO:0046983
Tpr7g0860 297 SMART finulus 217 266 IPR011598 GO:0046983
Tpr7g0860 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 260 IPR011598 GO:0046983
Tpr7g0860 297 CDD bHLH_AtIND_like 212 274 - -
Tpr7g0860 297 MobiDBLite consensus disorder prediction 161 176 - -
Tpr7g0860 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 277 IPR036638 GO:0046983
Tpr7g0860 297 MobiDBLite consensus disorder prediction 119 160 - -
Tpr7g0860 297 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 97 295 - -
Tpr7g0860 297 PANTHER TRANSCRIPTION FACTOR BHLH54 97 295 - -
Tpr7g0860 297 MobiDBLite consensus disorder prediction 201 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0860 Tpr-Chr7 7637397 7638799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0860 170 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 73.554 3.81e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g0860 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0860 - - mtr:MTR_3g103030 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0860 7 7637397 7638799 Tpr7g0860 7 7637397 7638799 ECH