Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0855 ATGATGGATGATCTTTTGTGCAAAGAAAATGAAACGTTTTTTGAAGTTGAAGAATGCTCAATGAATCAATCAGAAGAAGAGTATGTGAGATTGTTGATTCAGAAAGAGATTGCATTTGGTTTCAAAAAAGATGAAAATTTGGTTTTTGAAGAAGATTCTGTGAAACGTGGTCGTTTCAATGCAATCAATTGGATTCTGAAAAAAACAGAAGCATTGGATTTTCACTTTGAAACAGCTTATTTGTCAGTAACATATTTGGATCGATTCCTTTCAAAAAGATTCATTGATGGTGAGAAGGATTGGGCTATAAGATTGCTATCAATTGCATGTCTTTCTTTGGCTGCAAAGATGGAAGAGTACAATGTGCCAGGACTATCAAAATTTCAATTGGATGATAATTATTTCTTTGATGGAAAAGTGGTTCAAAAAATGGAGCTTTTTGTTCTTAGTACATTGGATTGGAACATGGGTATTATCACTCCCTTTTCATTCCTTTCTTACTTCATCAAAATGTTCTGCAATGAATCATCATCATCATCATCATCATCAAATCCTATTGTTTCCAATACAATGCAACCTATCTTCACTGTAATCATGGAAGAGATCAATCTAATGGATCACAAACCATCCGTTGTTGCAGCAGCTGCTACTTTAGTGGCATTGGATAAAAAATTGACCATAGAAGATGTGAGATTGAAAATGAATTCAATTTCTCAACATCCATTACTTGAACCAAATGATGTCTTTGCTTGCTACAATCTAATTCAAAGATTATATGAGGAGAAGATTAAAAGAGAAGAGCATAAGGCTTTATGTACACCAAATTCTTCGGTTATTCGATCAAGGCCAACTGACTATGCTGTTGCTATGACAAAGAGAAGAAGGCTCTCATTCACTGATGATGAAGATGGTGGTGACAAGAAGGGACCACACCAAGAAAATCCCAAAATTTGA 954 0.3459 MMDDLLCKENETFFEVEECSMNQSEEEYVRLLIQKEIAFGFKKDENLVFEEDSVKRGRFNAINWILKKTEALDFHFETAYLSVTYLDRFLSKRFIDGEKDWAIRLLSIACLSLAAKMEEYNVPGLSKFQLDDNYFFDGKVVQKMELFVLSTLDWNMGIITPFSFLSYFIKMFCNESSSSSSSSNPIVSNTMQPIFTVIMEEINLMDHKPSVVAAAATLVALDKKLTIEDVRLKMNSISQHPLLEPNDVFACYNLIQRLYEEKIKREEHKALCTPNSSVIRSRPTDYAVAMTKRRRLSFTDDEDGGDKKGPHQENPKI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0855 317 SMART cyclin_7 63 150 IPR013763 -
Tpr7g0855 317 Gene3D - 48 151 - -
Tpr7g0855 317 Pfam Cyclin, N-terminal domain 32 156 IPR006671 -
Tpr7g0855 317 SUPERFAMILY Cyclin-like 141 275 IPR036915 -
Tpr7g0855 317 MobiDBLite consensus disorder prediction 294 317 - -
Tpr7g0855 317 PANTHER CYCLINS 23 294 IPR039361 -
Tpr7g0855 317 SUPERFAMILY Cyclin-like 25 156 IPR036915 -
Tpr7g0855 317 Pfam Cyclin, C-terminal domain 159 272 IPR004367 -
Tpr7g0855 317 PANTHER CYCLIN-D5-1 23 294 - -
Tpr7g0855 317 CDD CYCLIN 57 149 IPR013763 -
Tpr7g0855 317 Gene3D - 152 278 - -
Tpr7g0855 317 ProSitePatterns Cyclins signature. 58 89 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0855 Tpr-Chr7 7598116 7600502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0855 5 238 Core Cell Cycle Gene Families AT4G37630 36.719 4.28e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0855 K18811 - gmx:100798728 332.798