Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0853 ATGGGTCGTTCAGCACCTGATATCAACATCGAACCTGAGCATTGTCCAGAAGCTGTTATCGAATGGTACCACAAAGCAAGTACAGGCAGAAGCGATGTGGCCTTGAAAGCTAAACAACATCTTCTTTTCTTGGGTTGGAAGTTATGGTATTTTGACAAAACATGTAAGTGGGAAATGCGTTATACTAATACCAATGGCAAAACCTTTGCCAGTCTTAAGTTGGCCTGTCAGAGTTGTATTGAAAGTGGAGGATGTTCCCTCAAACAACCTTCAACTGCAGCAACAACAAAATCAATTTCTTCGTCTCAATTACAGTCGAAAAAGAGACCGAGAGAATCCCAAGTAACTGGTGAAGAAGATGGAGTTTTTTCCCGCAAAAACCCTTATTTAGCCGCAGCGCCACCAGCAACATCAAACTTATCGTTTCCATTGCAGTCGATGAGTCAACCGACAGAATACAAAGAAGCCATGGAAGAAGATGATTTTTTTTCCTTCAAACACCCTTCATTCGCGGCACCACCAGCAGATGAAACATCAATCTTTTCGTCTCCAATGCAGTCGATGAATCAACCAAGAGAATACCAAGAAACCAATGAAAAAGATGGAGGTTTTTCCCTAAAACATCCTTCACCCGAAGCACCACAAGCAGCAGAAACATCAATCTTTTCGTTTCCATTTCAGTCGTTGTTGCAACCGAGAGAATACGAAGAAACCAATGAAGAAAATGGAGATTTTTTCCTCAAACACCCTTCTACTGCAGTACCAGCAGCAGCAACATCAATCCCTTGGTCTCCATTACAGCCAAAAGAGCAACCAAGAGAATCAGAAGAAACCGATGAAAAAGGAGGATGTTCCCTCAATCAACCTTCAACTGCAACACCAGCAGCAGCACTAGCAACAACATTGATCTCTTCGCCTCAATTACAGTCGAAAGAGACCCTGAGAGAATCCCAAGAAACCGATGAATCAACTTCTGATGAGGATTCTGACGATAGTTCAACTTCAGATGAGGATTCTGAACCTTCCAATCCTAGTTTTGGTAAAAAAGCTCCGGTGACTATGGTCTCAACATCAAAGGAAAAAGAGAATCAGGCTAGTCAATCTGAATCCGAAGTTACTAATTCGGCGGGAAGTTGTGAAAGAAGAAAGGTATTAAAGCTGAGTGTAATGGAGAAGAATTCAGAGAGTTGTAATAATCGAGGGAAAGTATTAAAGACGAGTATGGTGGATAATAATTCAGAGGGTTTCCGTAAAAGAGGGATGGTATTAAAGAGAGAAGGTGTAAGGGAAAAGTATTCACTTGTTTCTTGGTTGGTAAAGAATCAAGTGTTGGTTCCAGGGACTGATGTGTTTTGTCGCGGTAGTAACAATGTTGTCAAAAGAGGGAGTTTATTTTCCGAGGGTATAGTTTGTGATTGTTGTCATGTTAATTTCACTGTCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCAACTACTAGTATCTTGTTGGAAGACGGAAGGTCGTTGTTGGATTGTCAAAGGGAAGCTCAGAGTTTGCGTGATCAAACCGGGAATCATTGTGTAGCCGAAGCAAATTCTGAAGCAAATAATGATAATGTTTGTGGTATTTGTGGTTTTGGAGGCGACATAGTATTATGCGATCGATGTCCTTCTTCATTCCACCTCAGTTGTTTAGGTCTCGATCGAGTTCCGGATGGTGATTGGTTCTGTCCAACTTGTTGCTGCAAAATATGCTATGGACCCAAATGCAAAGAGGAATGTGCAGATCAAACTGATAACAATATTCTTGCTTGTGTTCAATGTGAGCAAAAATTTCACTCTGGGTGCGTAAAGGCTATAGGAGGATTAGGACCTACTGAAACGGAGAGCAATGTGAATAAGAAGACTTGGTTTTGCAGTGTAGTTTGTGGGAACATGTTCTTATGTCTAAAGAAGCTGTTAGGGAAACCAATTACGATCGCAGATAATATAACATGGACATTGTTGAAGAATAATGCGAGTAGTGATTACGATTATGATGGTGGAAATATTACTTCTAATGACTTTAGTCTAAATAAGAGAAAGTTGAATGCGGCTCTTGGTGTATTGTATGAGAGTTTTAACCCAAGCATTGATGCTTTCTCCGGAAGAGAGTTGATTAAAGATGTTGTATTTAGTAGAGACTCAAAACATAATCGTCTGAACTTTCGTGGTTTCTATAACGTGATTTTAGAGAAAAAGGGTGCAGTGGCTTCAGTGGCAACTATAAGGATTTATGGTCCAAAGGTTGCTGAGATAGTTTTCGTGGCTACCAAGGAACAATATCGAAAACAAGGATTGTGTCGTTTGTTGATGGACGAGCTTGAGAAGCAGTTGATTCGCTTAGGAGTTGGGAGCTTTGTTTTGCATTCATCTGAGCATGCTATAAACACTTGGACAAAATCATTTGGCTTTAATAGGATGAGTGGTAAAGAAAAGTGTCAATTTATTGACAATACTTTCTTAGAATTTCAGAACAGTATCATGTGCCTTAAACGACTGAATAGACCTATATGGCCTTACATTGCTCGATGA 2565 0.4035 MGRSAPDINIEPEHCPEAVIEWYHKASTGRSDVALKAKQHLLFLGWKLWYFDKTCKWEMRYTNTNGKTFASLKLACQSCIESGGCSLKQPSTAATTKSISSSQLQSKKRPRESQVTGEEDGVFSRKNPYLAAAPPATSNLSFPLQSMSQPTEYKEAMEEDDFFSFKHPSFAAPPADETSIFSSPMQSMNQPREYQETNEKDGGFSLKHPSPEAPQAAETSIFSFPFQSLLQPREYEETNEENGDFFLKHPSTAVPAAATSIPWSPLQPKEQPRESEETDEKGGCSLNQPSTATPAAALATTLISSPQLQSKETLRESQETDESTSDEDSDDSSTSDEDSEPSNPSFGKKAPVTMVSTSKEKENQASQSESEVTNSAGSCERRKVLKLSVMEKNSESCNNRGKVLKTSMVDNNSEGFRKRGMVLKREGVREKYSLVSWLVKNQVLVPGTDVFCRGSNNVVKRGSLFSEGIVCDCCHVNFTVTGFEAHAGCTRHRPTTSILLEDGRSLLDCQREAQSLRDQTGNHCVAEANSEANNDNVCGICGFGGDIVLCDRCPSSFHLSCLGLDRVPDGDWFCPTCCCKICYGPKCKEECADQTDNNILACVQCEQKFHSGCVKAIGGLGPTETESNVNKKTWFCSVVCGNMFLCLKKLLGKPITIADNITWTLLKNNASSDYDYDGGNITSNDFSLNKRKLNAALGVLYESFNPSIDAFSGRELIKDVVFSRDSKHNRLNFRGFYNVILEKKGAVASVATIRIYGPKVAEIVFVATKEQYRKQGLCRLLMDELEKQLIRLGVGSFVLHSSEHAINTWTKSFGFNRMSGKEKCQFIDNTFLEFQNSIMCLKRLNRPIWPYIAR* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0853 854 MobiDBLite consensus disorder prediction 349 377 - -
Tpr7g0853 854 CDD NAT_SF 739 800 - -
Tpr7g0853 854 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 737 831 IPR016181 -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 184 219 - -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 321 337 - -
Tpr7g0853 854 ProSiteProfiles Zinc finger PHD-type profile. 535 580 IPR019787 -
Tpr7g0853 854 Pfam Tify domain binding domain 462 513 IPR032308 -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 96 110 - -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 282 313 - -
Tpr7g0853 854 Pfam PHD-finger 538 579 IPR019787 -
Tpr7g0853 854 Gene3D - 708 830 - -
Tpr7g0853 854 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 847 - -
Tpr7g0853 854 SUPERFAMILY FYVE/PHD zinc finger 528 588 IPR011011 -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 96 126 - -
Tpr7g0853 854 Pfam Acetyltransferase (GNAT) family 737 815 IPR000182 GO:0016407
Tpr7g0853 854 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 6 847 - -
Tpr7g0853 854 MobiDBLite consensus disorder prediction 231 377 - -
Tpr7g0853 854 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 699 847 IPR000182 GO:0016407
Tpr7g0853 854 SMART PHD_3 586 640 IPR001965 -
Tpr7g0853 854 SMART PHD_3 537 578 IPR001965 -
Tpr7g0853 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 524 597 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0853 Tpr-Chr7 7570916 7573710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0853 433 787 PHD Transcription Factor Family AT5G58610 40.111 1.36e-81 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr7g0853 Acetyltransf_1 2.8e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0853 - - mtr:MTR_3g103110 876.7