Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0852 ATGCGTTATACTAATACCGATGGCAAAACCTTTGCCAGCCTTAAATTGGCCTGTCAGAGTTGTATTGAAAGTGGAGGATGTTCCCTCAAACAACCTTCAACTGCACCAACAACAAAATCAATTTCTTCGTCTCAATTACAGTCGAAAAAAAGACCGAGAGAATCCCAAGTAACTGGTGAAGAAGATGAAGTTTTTTCCTGCAAAAAACCTTATTTAGCAGCAGCGCCACCAGCAACATCAGTCTTATCATTTCCATTGCAGTCGATGAGTCAACCGACAGAATACAAAGAAGCCATGGAAGAAGAAGATTCTTTTTCCTTCAAACACCTTTCATTCGAGGCACCACCAGCAGATTTTGACAGTGATTCAACTTCCGATGAGGATTCTGACAGAGATTCAACTTCCGATGAGGATTCTGACAGTGATTCAACTTCCGATGAGGATTCTGACAGTGATTCAACTTCCGATGAGGATTCTGACGATAGTTCAACTTCAGATGAGGATTTTGAACCTTCCAATCCTAGTTTTGGTAAAAAAGCTCCGGTGACTATGGTCTCAACATCAAAAGAAAATGAGAATCAGGCTAGTCAATCTGAATCCGAAGTTACTAATTCGGCGGGAAGTTGTGAAAGAGGAAAGGTATTAAAGCTGAGTGTAATGGAGAAGAATTCTGAGAGTTGTAATAATCGAGGGAAAGTATTAAAGACGGGTATGGTGGCTAAGAATTCAGAGGGTTGCCGTAAAAGAGGGATGGTATTAAAGAGGGAAGGTGTAAGGGAAAGGTATTCACTTGTTTCTTGGTTGGTAAAGAATCAAATTTTGGTTCCAGGGACAGATGTGTTTTGTCGCGGTAGTAACAATGTTGTCAAAAGAGGGAGTTTATTTTCTGAGGGTATAGTTTGTGATTGTTGTCATGTTAATTTCACTGTCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCAACTGCTAGTATCTTGTTGGAAGACGGAAGGTCGTTGTTGGAATGTCAAAGGGAAGCTCAGAGTTTGCGTGATCAAACAGGGAATCATTGTGTAGCCGAAGCAAATTCTGAAGCAAATAATGATAATGTTTGTGGTATTTGTGGTTTTGGAGGCGACATAGTACTATGCGATCGATGTCCTTCTTCATTCCACCTCAGTTGTTTAGGTCTCGATCGAGTTCCAGATGGTGATTGGTTCTGTCCAACTTGTTGCTGCAAAATATGCTATGGACCCAAATGCAAAGAGGAATGTGCAGATCAAACTGATAACAATATTCTTGCTTGTGTTCAATGTGAGCAAAAATTTCACTCTGGGTGCGTAAAGGCTATCGGAGGATTTGGACCTACTGAAACGGAGAGCAATGCGAATAAGAAGACTTGGTTTTGCAGTGTAGTTTGTGGGAACATGTTCTTATGTCTAAAGAAGCTGTTAGGGAAATCAATTACGATCGCAGATAATATAACATGGACATTGTTGAAGAATGATGCGAGTAGTGATTACGATTATGATGGTGGAAAGTTTACTTCTAATGACTTTAGTCTAAATAAGAGAAAGTTGAATGCGGCTCTTGGTGTATTGTATGAGAGTTTTAACCCAAGCATTGATGCTTTCTCCGGAAGAGAGTTGATTAAAGATGTTGTATTTAGTAGAGACTCAAAACATAATCGTCTGAACTTTCGTGGTTTCTATAACGTGATTTTAGAGAAAAAGGGTGCAGTGGCTTCAGTGGCAACTATAAGGATTTATGGTCCAAAGGTTGCTGAGATAGTTTTCGTGGCTACCAAGGAACAATATCGAAAACAAGGATTGTGTCGTTTGTTGATGGACGAGCTTGAGAAGCAATTGATTCGCTTAGGAGTTGGGAGCTTTGTTTTGCATTCATCTGAGCATGCTATAAACACTTGGACAAAATCATTTGGCTTTAATAGGATGAGTGGTAAAGAAAAGTGTCAATTTATTGACAATACTTTCTTAGAATTTCAGAACAGTATCATGTGCCTTAAACGACTGAATAGACCTATATGGCCTTACATTGCTGGATGTTAG 2058 0.3975 MRYTNTDGKTFASLKLACQSCIESGGCSLKQPSTAPTTKSISSSQLQSKKRPRESQVTGEEDEVFSCKKPYLAAAPPATSVLSFPLQSMSQPTEYKEAMEEEDSFSFKHLSFEAPPADFDSDSTSDEDSDRDSTSDEDSDSDSTSDEDSDSDSTSDEDSDDSSTSDEDFEPSNPSFGKKAPVTMVSTSKENENQASQSESEVTNSAGSCERGKVLKLSVMEKNSESCNNRGKVLKTGMVAKNSEGCRKRGMVLKREGVRERYSLVSWLVKNQILVPGTDVFCRGSNNVVKRGSLFSEGIVCDCCHVNFTVTGFEAHAGCTRHRPTASILLEDGRSLLECQREAQSLRDQTGNHCVAEANSEANNDNVCGICGFGGDIVLCDRCPSSFHLSCLGLDRVPDGDWFCPTCCCKICYGPKCKEECADQTDNNILACVQCEQKFHSGCVKAIGGFGPTETESNANKKTWFCSVVCGNMFLCLKKLLGKSITIADNITWTLLKNDASSDYDYDGGKFTSNDFSLNKRKLNAALGVLYESFNPSIDAFSGRELIKDVVFSRDSKHNRLNFRGFYNVILEKKGAVASVATIRIYGPKVAEIVFVATKEQYRKQGLCRLLMDELEKQLIRLGVGSFVLHSSEHAINTWTKSFGFNRMSGKEKCQFIDNTFLEFQNSIMCLKRLNRPIWPYIAGC* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0852 685 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 354 424 IPR013083 -
Tpr7g0852 685 MobiDBLite consensus disorder prediction 179 207 - -
Tpr7g0852 685 CDD NAT_SF 569 630 - -
Tpr7g0852 685 Pfam Tify domain binding domain 292 343 IPR032308 -
Tpr7g0852 685 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 529 677 IPR000182 GO:0016407
Tpr7g0852 685 Gene3D - 536 660 - -
Tpr7g0852 685 MobiDBLite consensus disorder prediction 29 52 - -
Tpr7g0852 685 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 567 661 IPR016181 -
Tpr7g0852 685 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 1 677 - -
Tpr7g0852 685 MobiDBLite consensus disorder prediction 29 64 - -
Tpr7g0852 685 MobiDBLite consensus disorder prediction 120 167 - -
Tpr7g0852 685 Pfam Acetyltransferase (GNAT) family 567 645 IPR000182 GO:0016407
Tpr7g0852 685 ProSiteProfiles Zinc finger PHD-type profile. 365 410 IPR019787 -
Tpr7g0852 685 MobiDBLite consensus disorder prediction 84 207 - -
Tpr7g0852 685 Pfam PHD-finger 368 409 IPR019787 -
Tpr7g0852 685 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 677 - -
Tpr7g0852 685 SUPERFAMILY FYVE/PHD zinc finger 358 418 IPR011011 -
Tpr7g0852 685 SMART PHD_3 416 470 IPR001965 -
Tpr7g0852 685 SMART PHD_3 367 408 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0852 Tpr-Chr7 7562889 7565154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0852 222 617 PHD Transcription Factor Family AT5G58610 37.713 8.40e-83 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr7g0852 Acetyltransf_1 2e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0852 - - mtr:MTR_3g103110 781.171