Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0809 ATGGACAAAGACGTGTTACATTGGTTGGAACAACAAATGGAAGAAGAGCAACACACAACCAATGCAACATGGACCAATACAACTAGTGCCAACAACAATGGTTTGGAAGTTGATTGGTACATGAACAATATACCAAATCTTCAAAATCACACCCAACAACAAAACAATGTTTGTCCATTAGATCCAAACACATTTGGTCTTATGCAACCTTTGGGTTCCTCCTCTTTGTTATCACAACCTAAATCCAACTTATCCCATTTACTTAATACCAACGACAATATCGACATCAGCACCACCACCACCACCACTGTCAACAACAATGACAACAAAAATCCATTTGGTAGTGTTTTCAATTTGGAATCCCAAAGTGGTTTGCTAACTCCATTTCATAGGAAGCAAATAGACTTATCAACCCAAACCAACTCATTAGCCAAGTTTCCTATGACTCATGCTGTTGGATTTGGCTCAATAGGTTTAGAAGGAGAAAGTTCCTTTGGTGGTCCAGGGCCTTCAAATTCGTCGTTTTTTAGTAAGGCTGAGATCTCGAGGCCTCTCAATGATTTTTCAGCAAATTTTGTGCCATCCACGAATGAGATATGTTCTGACATAGGAAAGACAAATAAGTTTGAATCATTGCCGATTTCGCAATTTGCCTCAACATGGCTGAAGGAGTTTGGGAAGATGAGGGAGAAAGAGGGAAATGAGGTGGTTGAGGGAGGATTGAATTATGAATCTAATGAGGTGGTTGATGTTGCGAATATGGAGAATAATGGTAGAAATGATTATAATGCAAATAACAACGATGGAGGCAACAATAATAATAATAACATTGTGTTTAATAATGATGATGGTGATGAAAATCATCGTGATGATGAATGGGAGCGAAAAGTGAAGAAGAAGAATAAGAAGAAGGAAAGGACAACAAAAAGTCTCATGGCTGAGAGACGGAGAAGGAAGAAACTCTGTGATAGGATGCACATGCTTCGATCTATTGTGCCAAATATAAGCAAGATGGATAAAGCTTCAATACTTGGAGATGCTGCTGACTACTTAAAAGAGTTACAACAAAAAATTAATAATCTTCAAAGTGAATTAGAGCCAAGCTCACCTGGATTGTTCAATGTGACACCCACCATACCAACTCTTCTTGTTCCACTGAAAGAGGAATTGTGTCATAGCAATGTGTCAAGCCCTAAAAACCAATCAACAAAGGTAGAGGTTAGGGAAAGGGAAGGGGGAACTGTCGACATCCATGTGTCTTGCACCCACAAATCAGGAATTTTGCATTTGACTATGATGACATTGGATAACCTCGGACTGGATGTGCATCAAGCTGTCATAAATTGTTTCAATGGTTTTTCTATAGATGTGTTCAAAGCCAAGCAATACAGAGAAGGCCAGAAAGTGCTTCCTGAGCAAATTAAAGCAGTATTGTTGAACACATTGAGTTTCCATGGCATGATGTGA 1467 0.3899 MDKDVLHWLEQQMEEEQHTTNATWTNTTSANNNGLEVDWYMNNIPNLQNHTQQQNNVCPLDPNTFGLMQPLGSSSLLSQPKSNLSHLLNTNDNIDISTTTTTTVNNNDNKNPFGSVFNLESQSGLLTPFHRKQIDLSTQTNSLAKFPMTHAVGFGSIGLEGESSFGGPGPSNSSFFSKAEISRPLNDFSANFVPSTNEICSDIGKTNKFESLPISQFASTWLKEFGKMREKEGNEVVEGGLNYESNEVVDVANMENNGRNDYNANNNDGGNNNNNNIVFNNDDGDENHRDDEWERKVKKKNKKKERTTKSLMAERRRRKKLCDRMHMLRSIVPNISKMDKASILGDAADYLKELQQKINNLQSELEPSSPGLFNVTPTIPTLLVPLKEELCHSNVSSPKNQSTKVEVREREGGTVDIHVSCTHKSGILHLTMMTLDNLGLDVHQAVINCFNGFSIDVFKAKQYREGQKVLPEQIKAVLLNTLSFHGMM* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0809 488 Pfam Helix-loop-helix DNA-binding domain 312 355 IPR011598 GO:0046983
Tpr7g0809 488 MobiDBLite consensus disorder prediction 281 309 - -
Tpr7g0809 488 CDD ACT_UUR-ACR-like 417 477 - -
Tpr7g0809 488 Gene3D - 295 368 IPR036638 GO:0046983
Tpr7g0809 488 SMART finulus 311 360 IPR011598 GO:0046983
Tpr7g0809 488 CDD bHLH_AtAMS_like 311 371 - -
Tpr7g0809 488 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 102 488 - -
Tpr7g0809 488 Coils Coil 344 364 - -
Tpr7g0809 488 PANTHER TRANSCRIPTION FACTOR SCREAM2 102 488 - -
Tpr7g0809 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 354 IPR011598 GO:0046983
Tpr7g0809 488 MobiDBLite consensus disorder prediction 282 298 - -
Tpr7g0809 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 302 367 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0809 Tpr-Chr7 7137950 7142744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0809 35 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 35.106 3.31e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g0809 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0809 - - cam:101515675 307.76