Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0801 ATGAGAATAGCTAGGAAATGTTCATATTGTGGAAATTTAGGCCATAATTCAAGGACTTGCAATAACAGTCTCAGTCAAGACCAATTTCATCTTTATTCTACTTCACCTTCATATTTTGCTACTAAATGGAGTTTCAGAAAGAACTACCTGCTATCATCACAATCATATTCCTCTTTATCAAAATCATACTCCTTGCCTACACTGTTTGGTACAAATGAAAATTCAGATAGTTACTTAGGAAGTGGACATATGTCAACAATTGGATCCAGTAAAAAAGGTATGCCTTGGACTGAGGAGGAGCACCATATGTTTCTTAGAGGACTTGAGAAGCTTGGGAAGGGTAACTGGAGAGGTATATCTAGAGATTTTGTGACAACAAGAACACCAACTCAGGTGGCAAGTCATGCACAAAAACATTTTCTTCGTCAGTCTCAGAATAGCTTCATCAACAAAAGAAAACATCTTAGGCTCCTTAAGGTGGGGTGTGAGAGTAAAACTAGATTTGAAGCATTTTCTGAACAAAGTGAAGCAATTGTTACATTATCAGGAATAACTAATCTGACAGAAAATGATATCAGTTACATAAGCCAACTAAGTGGAAGTAGAAATTTTCTTTCTCAGTGGCTTTCTCATCCTCAATATTCGGTGCTGAAATTGCCTACCTCTTCAACTTCAACAAATTGTACTTCTCGGAGTGTAGCACCTGATTTAGAACTCAAGCTTGCAACTCCTATGCCTTTAGAGGTAACAGAGGCATGCTCTGTAGGCCCTTTAAGCTATAACCATTATTGA 792 0.375 MRIARKCSYCGNLGHNSRTCNNSLSQDQFHLYSTSPSYFATKWSFRKNYLLSSQSYSSLSKSYSLPTLFGTNENSDSYLGSGHMSTIGSSKKGMPWTEEEHHMFLRGLEKLGKGNWRGISRDFVTTRTPTQVASHAQKHFLRQSQNSFINKRKHLRLLKVGCESKTRFEAFSEQSEAIVTLSGITNLTENDISYISQLSGSRNFLSQWLSHPQYSVLKLPTSSTSTNCTSRSVAPDLELKLATPMPLEVTEACSVGPLSYNHY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0801 263 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 91 143 IPR006447 GO:0003677
Tpr7g0801 263 ProSiteProfiles Myb-like domain profile. 88 140 IPR001005 -
Tpr7g0801 263 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 4 252 - -
Tpr7g0801 263 SUPERFAMILY Homeodomain-like 89 144 IPR009057 -
Tpr7g0801 263 Gene3D - 94 145 - -
Tpr7g0801 263 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Tpr7g0801 263 ProSiteProfiles SANT domain profile. 91 144 IPR017884 -
Tpr7g0801 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Tpr7g0801 263 PANTHER TRANSCRIPTION FACTOR KUA1 4 252 - -
Tpr7g0801 263 CDD SANT 95 140 IPR001005 -
Tpr7g0801 263 SMART sant 92 142 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0801 Tpr-Chr7 7083798 7085397 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr7g0801 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0801 - - mtr:MTR_3g104370 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0801 7 7083798 7085397 Tpr7g0801 7 7083798 7085397 ECH