Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0793 ATGAACGGAATTCAAGTAAAAGAGGAAGAAATTCTAGCTTATGCAAGTGTTGGTTCAACATCATGTTCACCTTCTTCATCTTCAGGTTCAAACCTTACACCAAAACCAATGGAAGGGTTACATGAAATTGGTCCACCTCCATTTCTTACCAAAACTTTTGATGTTGTTGAAGATCCATCTACTGATTCAATTGTTTCATGGAGTGGTGCTCGTAATAGTTTCGTTGTTTGGGATCTTCACAAATTCTCCACCACCATTTTGCCTCGTTACTTCAAACACAGTAATTTCTCTAGCTTCGTTCGTCAACTTAATACTTATGGTTTTAGAAAAGTTGATCCGGATCGATGGGAATTTGCGAACGAAGGTTTTTTAGCTGGACAGAGGAACTTGTTGAAAACAATCAAGAGAAGAAGAAATGTTACACAGTCACAGGTTATGCAACAAGAAACTGGTGGTGGTGCTTGTATTGAATTAGGAGAGTATGGTCTTGAAGGTGAGATTGAGAGGTTAAGAAGGGACAGGGCTGTTTTAATGGCTGAAATTGTGAAGTTGAGACAGCTGCAGCATAATTCAAGGGATCAGTTATCTGCTATGGAAGCTAGGCTGTTGATTACTGAGAAGAAACATCAACAGATGATGACATTCCTTGCAAAAGCACTCAGTAATCAATCTTTCATACAACAATTGGCAAACAACAGAGAGTTGAAAGGCGTTGAAATGAAGCGAAAACGGAGACTCACTGCTAGTTCAAGTTTGGAGAATTTGCAAAATGATTCTGCTACCATGATGACAGTGCCAATTGAATCTGTGATTGATTATTCTAGTCAAGAACAACAAGAGGGGTTGACTACTATTGAGTCTGAGATGGAGACATTGTTAAATGCTTATGATAACGAATCAAGCAGTGAAATCAAAGATTACAGTACATTGACTTCTGTTCCAAGTGCTAAAGTTGAGAGTAATTTGGGTGATACTGTGTGGGAGGATTTACTGAACCAAGAATTGGTTGGTGGGAATCCAGAGGATGAAGTTGTGATTGGTGATCTTTCTCGAATTGATGTGCCGGTTGAGGATTTGGTAGAAAAGAATGATGATTGGACTTTGGATTTGCAGAACCTTGTTGATCAAATGGGTTTTGAACCTTAG 1146 0.3892 MNGIQVKEEEILAYASVGSTSCSPSSSSGSNLTPKPMEGLHEIGPPPFLTKTFDVVEDPSTDSIVSWSGARNSFVVWDLHKFSTTILPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNVTQSQVMQQETGGGACIELGEYGLEGEIERLRRDRAVLMAEIVKLRQLQHNSRDQLSAMEARLLITEKKHQQMMTFLAKALSNQSFIQQLANNRELKGVEMKRKRRLTASSSLENLQNDSATMMTVPIESVIDYSSQEQQEGLTTIESEMETLLNAYDNESSSEIKDYSTLTSVPSAKVESNLGDTVWEDLLNQELVGGNPEDEVVIGDLSRIDVPVEDLVEKNDDWTLDLQNLVDQMGFEP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0793 381 Pfam HSF-type DNA-binding 48 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 SMART hsfneu3 44 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 Gene3D - 41 138 IPR036388 -
Tpr7g0793 381 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 335 IPR027725 -
Tpr7g0793 381 SUPERFAMILY "Winged helix" DNA-binding domain 44 137 IPR036390 -
Tpr7g0793 381 ProSitePatterns HSF-type DNA-binding domain signature. 87 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 PRINTS Heat shock factor (HSF) domain signature 99 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr7g0793 381 Coils Coil 167 187 - -
Tpr7g0793 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr7g0793 381 MobiDBLite consensus disorder prediction 18 34 - -
Tpr7g0793 381 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 17 335 - -
Tpr7g0793 381 MobiDBLite consensus disorder prediction 18 37 - -
Tpr7g0793 381 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0793 Tpr-Chr7 6989211 6992526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0793 34 379 HSF AT2G26150 52.528 2.36e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr7g0793 HSF_DNA-bind 2.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0793 K09419 - gmx:100794605 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0793 7 6989211 6992526 Tpr7g0793 7 6989211 6992526 ECH