Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0788 ATGGTGGCTGTTGACAAAGACAAGAACAGTTCTTATGCCTTTCGTTGGGCAATTAGACATCTTGATAATCCTGGATTTGAACCGCGTCTCTCGTGGTTACAAAGTCAGACTAATATGGTTACATTGTTGAACGCAGAGGGCACACTTGTTTTTGAACCCGATGAAGAGGATGTAGCAAATGTTTTCGGTAACTTACGTGGATTGTGTCAACGTAAAGTTGTCACCGTGAAAGAAGCTGTAGTCGATGATAATGATGTTGTGAAAGGATTATTAGATTTTGCAAACAAAAATCTTGTACATAGTATTGTCATTGGTGCATCCACCAAGAATCATTTACCAAGTCTTAAAAAGTTTAAAGCATTTAATGATACACCAACAGCCATGATGAAATCAGCACCAGATTATTGTTCTGTATACGTAATTTCAAAATTGAAGATTGTGTCGGCTAGATCGGCGGTACGATCAATGGCGAATCAGACTAGTCCAATAAAACAACTACCTTTTCAAGTATCCTCACAGAGTGAATTTGAAGGTGGAATAAGGTCAATACTACCTAGAACCGGTGAAACTAATGAAGCATCAGAATCTAGGTCTTTTGACAGCATTGTTGGTACAGTAAAAGGAACGGCGCGTGAGAGGCCAAGGAGTGCAGGAAGCAATCAATCATTGGACAATATCGATCTACCGGGTGGTCGTGGACGACAATGGGCGTCAATGGATGAAAGAGAGATGGTGACGCTTGCGCCAATTGTCGATGTAAATAGTGATTTGGATCTAATAGATTCCTATGGGACAAAGCCAACTAATCTTACCTCACAAGAACTTGAAGCTGAGATGAAAAGATTGAGGCGCGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCGAAAAATCAGGCGGAACAAATTCGTCAATGGAAATTGGAAGGGGAAAAAAAGGCTGTGGAAGCCAGGTTGTCTCAAGAGGCAGCTCTTGCAATGGCGGAAAGGGAGAAGGCTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAAGCCAAGAGGAAGGCTGAACAGGAGGTACAAAGAAGAAGGGAGGTAGAGATGAAGGCAAGGAAAGAGGCCGAAGAGAGGGATCGAGTATTAACCGCATTGGCTCAGAAGGATAATCGATATCGAAAATACACAATGCAGGAGATTGAAGTTGCTACTGAGAAATTCTCACTATCAAAGAAACTAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGTCACCTTGATCATACCGCAGTTGCAATCAAGCTTTTAAATCCTGAAGCTTCTCAAGGAAGGAAGCAATTCCAACAAGAGGTTGAGGTACTAAGTTGTATTAGACATCCAAATATGGTCCTCCTCCTCGGAGCATGTCCGGAGCATGGTTGTTTGGTGTATGAATTCATGGATAACGGTAGCTTAGAAGATAGATTATTTCGAAGACAAAACAGCAAGCCTCTATCATGGCAAAAAAGGTTCCAAATAGCAGCAGATATTGCAACGGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCTATCGTGCACCGAGACCTTAAACCATCAAACATTCTTTTAGACAGGAATTACGTGAGTAAAATCAGCGATGTTGGCCTCGCGAGATTAGTCCCTCCTTCTGTAGCTGACAATGTGACACAATATTACATGACTTCGGCTGCTGGAACATTTTGTTATATTGATCCTGAGTATCAACAAACAGGAATATTAACAACACAATCAGATGTTTACTCATTGGGGATAATGCTACTACAGATAATCACAGCCAAACCTCCAATGGGACTTGCTCACCATGTTAAAAAGGCGGTCGAAAATGATCAAATCGAGGAGATTCTTGATCCTGTGGTGACTGATTGGCCGGTTGAAGCGGCTCTATCATTTGCTAAATTAGCATTGAGTTGTACAGAACTCAGCAAGAAAGATAGGCCAAGTCTTGCAACAGTTATATTGCCAGAGCTTAACAGGTTAAGAGACCTTGGAGATACTGATAATCATGTTTTTACTGATACTAAGAACAATTGCCATACGCCACGCCCTCCTATGGCTAACTGA 2100 0.4214 MVAVDKDKNSSYAFRWAIRHLDNPGFEPRLSWLQSQTNMVTLLNAEGTLVFEPDEEDVANVFGNLRGLCQRKVVTVKEAVVDDNDVVKGLLDFANKNLVHSIVIGASTKNHLPSLKKFKAFNDTPTAMMKSAPDYCSVYVISKLKIVSARSAVRSMANQTSPIKQLPFQVSSQSEFEGGIRSILPRTGETNEASESRSFDSIVGTVKGTARERPRSAGSNQSLDNIDLPGGRGRQWASMDEREMVTLAPIVDVNSDLDLIDSYGTKPTNLTSQELEAEMKRLRRELKQTMDMYSSACKQAISAKNQAEQIRQWKLEGEKKAVEARLSQEAALAMAEREKARAKAALEAAEEAKRKAEQEVQRRREVEMKARKEAEERDRVLTALAQKDNRYRKYTMQEIEVATEKFSLSKKLGEGGYGPVFKGHLDHTAVAIKLLNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEFMDNGSLEDRLFRRQNSKPLSWQKRFQIAADIATALLFLHQTKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPPSVADNVTQYYMTSAAGTFCYIDPEYQQTGILTTQSDVYSLGIMLLQIITAKPPMGLAHHVKKAVENDQIEEILDPVVTDWPVEAALSFAKLALSCTELSKKDRPSLATVILPELNRLRDLGDTDNHVFTDTKNNCHTPRPPMAN* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0788 699 ProSiteProfiles Protein kinase domain profile. 406 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0788 699 CDD STK_N 2 143 - -
Tpr7g0788 699 Gene3D Transferase(Phosphotransferase) domain 1 479 690 - -
Tpr7g0788 699 Coils Coil 272 299 - -
Tpr7g0788 699 CDD STKc_IRAK 412 672 - -
Tpr7g0788 699 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 1 680 - -
Tpr7g0788 699 MobiDBLite consensus disorder prediction 187 203 - -
Tpr7g0788 699 Gene3D Phosphorylase Kinase; domain 1 384 478 - -
Tpr7g0788 699 PANTHER OS02G0152300 PROTEIN 1 680 - -
Tpr7g0788 699 SMART serkin_6 406 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0788 699 MobiDBLite consensus disorder prediction 186 229 - -
Tpr7g0788 699 SUPERFAMILY Protein kinase-like (PK-like) 390 665 IPR011009 -
Tpr7g0788 699 Pfam Protein tyrosine and serine/threonine kinase 407 664 IPR001245 GO:0004672|GO:0006468
Tpr7g0788 699 Gene3D HUPs 1 141 IPR014729 -
Tpr7g0788 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Tpr7g0788 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 114 - -
Tpr7g0788 699 Coils Coil 323 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0788 Tpr-Chr7 6935342 6938522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0788 78 691 Receptor kinase-like Gene Family AT5G12000 56.220 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr7g0788 PK_Tyr_Ser-Thr 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0788 - - gmx:100798861 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0788 7 6935342 6938522 Tpr7g0788 7 6935342 6938522 ECH