Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0778 ATGAGTTTAAGAACAAAAAAAGATGTTTCATCTTCTGAAATTCATATACCAGCTGAGATTGATTGGCATATGTTAGACAAATCAAAGTTTTTCTTCCTTGGCGCCGCCTTATTCTCTGGTGTTTCAGCAGCACTTTATCCAATGGTTGTGTTGAAAACTCGTCAACAGGTTTCTTCTTCACACTATTCTTGTATCAACATGTCTTGTGCTATTATGCGTTATGAAGGTTTTAGAGGTTTTTATAAAGGTTTTGGTACTTCTTTAATGGGAACTATTCCTGCTAGAGCACTTTATATGACAGCACTTGAAGTTACTAAGAGTAACGTTGGTACTGCTTTTGTTGAATTGGGTTTTTCTGATAATACTGCTACTGCTATTGCTAGTGCTGCTGCTGGTGTTACTTCTGCTATGTCTGCACAATTAGTTTGGACCCCAATTGATGTTGTGAGTCAAAGACTCATGGTACAAGGTTGTACTAGTAGTAGTAGTGGTAGTAGTGTTGGTGGTGGAAAGAGTATTTTGGCTAATCTTAACTCTGAGAATTATAGAAATGGTTTTGATGTTTTTAGGAAAATTCTATATGCTGATGGACCAAGAGGGTTCTATAGAGGATTTGGGATTTCAATTCTGACTTATGCACCTTCTAATGCTGTTTGGTGGACTTCATATTCTATGGTTCATAGGTTCATTTGGGGTAATTTTGGTTCATGTTTGTGTAAGAGTGATAATTTGAGTGATGGTTGTGTTGGTTTTAGGCCTGATTCTAAGGCAATGGTGGGTGTACAAGGTTTAAGTGCTGTTGTGGCTAGTGGAGTTTCTGCAATTGTGACAATGCCTTTTGATACAATTAAGACTAGGTTGCAGGTTTTGGATACAGAAGAGAATGGTAGAAGAAGGCCATTAACTTTTGTGCAAACTGTTAGGAGTTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTACAGAGGATTAGGACCAAGGTGGGTTTCTATGTCTATGTCTGCCACAACTATGATTACTACTTACGAGTTTTTGAAACGCTTGTCTACCAAGAGGCAAGATTGA 1062 0.3795 MSLRTKKDVSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCINMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSNVGTAFVELGFSDNTATAIASAAAGVTSAMSAQLVWTPIDVVSQRLMVQGCTSSSSGSSVGGGKSILANLNSENYRNGFDVFRKILYADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWGNFGSCLCKSDNLSDGCVGFRPDSKAMVGVQGLSAVVASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFVQTVRSLVNEGGLFACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKRQD* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0778 353 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Tpr7g0778 353 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Tpr7g0778 353 PRINTS Mitochondrial carrier protein signature 266 288 IPR002067 GO:0055085
Tpr7g0778 353 SUPERFAMILY Mitochondrial carrier 23 344 IPR023395 -
Tpr7g0778 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 229 IPR018108 -
Tpr7g0778 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 353 - -
Tpr7g0778 353 Gene3D Mitochondrial carrier domain 29 353 IPR023395 -
Tpr7g0778 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 347 IPR018108 -
Tpr7g0778 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 353 - -
Tpr7g0778 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Tpr7g0778 353 Pfam Mitochondrial carrier protein 262 350 IPR018108 -
Tpr7g0778 353 Pfam Mitochondrial carrier protein 124 232 IPR018108 -
Tpr7g0778 353 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0778 Tpr-Chr7 6879600 6881498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0778 13 352 Chloroplast and Mitochondria Gene Families AT5G26200 66.765 9.77e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0778 K15121 - gmx:100784202 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0778 7 6879600 6881498 Tpr7g0778 7 6879600 6881498 ECH