Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0772 ATGGATGGTGGTAATAAGCATCAAGGTGGTGAAGTAAGCATGATGAAGAAGAAAACAGAAGAGGTGGTGACAATTTCAAATGATCATGATGATCATGGCTTGAAAGTGTTTGAATCTTTGCCTCAATGTGAAAATGAACTTGCTTCAAATTCTCCTGAAATAAGGTTCATCCCAAGCCCAAATAAGTCCCCAAAAGCTACTGCTACAAATGAAAATCTTACCACAAGAAAAACTTTTGTAAGATCAGTGTATTCTAAGCCCAAATCAAGGTTTGGTGAACAACCTTACCCTTTTGATGAAACCCTTTTAGAAGAGAATGTTACTTCTTTAAATTTGCAAGAACAATTAGCTTTTAGCAACTCATTTGATAAAGAATCGCATTCACCTTCGACGGCATCTCAAAGTTCTTCTGGTGAGGATCCTGATGAAATCATTTACAGGAAAGTTGAATTTAGTAAAGGCAAGCACAGGATACTACTAACGACTAAGGTTTTGATCGAATTGTCCATGTTTGTCTGCATCGCGGGTAGCTTGTTAGCTAGCTTAACAGTTGAGGAACTGAGAAGGATAGAGATTTGGAGTTTAGGACTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTGTTTACCAAATGGTTCATGCACGTTGTTATTTTCATGATTGAAATGAACTTCTTGTTGAGGAAAAAAGTGCTTTATTTTGTCCATGGAGTGAAGAAATATGTCCAGGTTTTCATTTGGATCAGTTTGGTTCTCCTCACATGGACATTTTTTATCAAGCACGAGGTCCAGCGATCTGAATTGGCCGCAAAATTTTTGAATGATGTAACATGGACTCTTGTATCCCTTCTCATTGGATCATTTTTATGGGTCATAAAGAAATTCTTGCTGAAGACTTTGGCATTGAATTTCCATGTGAAGGCTTTCTTTGATCGAATTCAAGAATCGATCTTCCATCAATATGTTCTGCAGACACTTTCTGGGCCTCCACTTATGGATGAGGCTGAGAAGGTTGGGGGATCACAGAGTATAGGCCATTTTAGTTTCAGGAGTACAACTGGTAAAGGTGGCATAAAGAAAGAGGTTATCGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCCGCGTGGACCATGAAGATTTTGGTAGATGCAGTGATGAACTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAAGTTTTTATGATGTAAAAAATGAGAAAACTGATAAAGAAATTACTAATGAGATGGAAGCAACCGCTGCGGCCTATTATGTTTTCAGGAATGTTGCTGCTACCCCTTGTTGCAAGGACATTGATGAAAATGAACTACGTCGATTTATGATTAAAGAGGAAATTCCTTTGGTATTTCCCCTACTGGCTCATGCAGAGACAGGGTTAATTACCAGAAAGTCTTTAGCAGATTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCACACGCCTTATGCGATACTAGAACAGCTGTTAAACAATTAAACAAGCTCGTGACAGGAGTCCTAGTGCTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACCACAAAAGTACTTGTATTCCTCTCATCGCAGCTAGTCCTTGCAGGTTTCATGTTTGGAAACACATGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTCGATGTTGGCGATCGGTGTGTTGTAGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTATTCTTGAAGCTTAATAATGAGAAGGTCTATTATCCAAACTCTATCCTCGCCACAAAACCGATTAGCAATTATTACAGAAGTCCAAATATGGTTGATGGTGTAGAGTTTTCAATTGATTTTATGACACCAGCAGAGAAAATTGGAGCATTGAAAGAAAAAGTGCAGAGGTACTTGGAGAGGAATCCACAATACTGGCATCCTAATTTCACCATGATAGTGATAGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATAAACTTTCAAGATTTTGGGGAGAAGGTTAAGCGAAAAAGTGAACTAGTGATGGAAATAAAGAGAATATTTGAAGAGCTCAATATCAAATACAACCTTCTTCCACAAGGTGTTCATCTCAGACACATGGAACCTGATACAAGTTATCTCAAATGA 2211 0.3831 MDGGNKHQGGEVSMMKKKTEEVVTISNDHDDHGLKVFESLPQCENELASNSPEIRFIPSPNKSPKATATNENLTTRKTFVRSVYSKPKSRFGEQPYPFDETLLEENVTSLNLQEQLAFSNSFDKESHSPSTASQSSSGEDPDEIIYRKVEFSKGKHRILLTTKVLIELSMFVCIAGSLLASLTVEELRRIEIWSLGLWRWCMLVMVTFCGMLFTKWFMHVVIFMIEMNFLLRKKVLYFVHGVKKYVQVFIWISLVLLTWTFFIKHEVQRSELAAKFLNDVTWTLVSLLIGSFLWVIKKFLLKTLALNFHVKAFFDRIQESIFHQYVLQTLSGPPLMDEAEKVGGSQSIGHFSFRSTTGKGGIKKEVIDMAKLHKMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDVKNEKTDKEITNEMEATAAAYYVFRNVAATPCCKDIDENELRRFMIKEEIPLVFPLLAHAETGLITRKSLADWVLKVYQERRALAHALCDTRTAVKQLNKLVTGVLVLVTIVVWLLLMEIATTKVLVFLSSQLVLAGFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNSILATKPISNYYRSPNMVDGVEFSIDFMTPAEKIGALKEKVQRYLERNPQYWHPNFTMIVIEIENVNKIKMGLYVTHTINFQDFGEKVKRKSELVMEIKRIFEELNIKYNLLPQGVHLRHMEPDTSYLK* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0772 736 SUPERFAMILY Sm-like ribonucleoproteins 559 618 IPR010920 -
Tpr7g0772 736 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 49 726 - -
Tpr7g0772 736 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 49 726 IPR016688 -
Tpr7g0772 736 PIRSF Memb_At2g17000 5 735 IPR016688 -
Tpr7g0772 736 Gene3D - 569 618 IPR023408 -
Tpr7g0772 736 Pfam Mechanosensitive ion channel 510 715 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0772 Tpr-Chr7 6836745 6840414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0772 49 725 Mechanosensitive Ion Channel Family AT5G12080 58.092 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0772 K22048 - gmx:100777617 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0772 7 6836745 6840414 Tpr7g0772 7 6836745 6840414 ECH