Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0770 ATGGATGGTAATAAGCATCATCAAGGTGGTGAAGTAAGCATGACTGAGAAGAAAAGAGAAGAGGTGGTGGTGGCAATTTCAAATGTGGGTGGAGAAACCCATTACAATGACCATGATCATGAGTTGAAAGGGGTTGAATATTCGCCTCGTTACGCTTCAAAGTCACCACCTTTAAACTGTGCTTCCCCTGAGATAAGGTTCATCCCAAGCCCAAATAAGCCCCCAAAAATTCCAACTACAAATGAAAACCTTACTCCAAGAAAAAATCTTGCAAGATCAGTGTATTCCAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGAGACCCTTTTAGAAGAGAATGTTACTTCAACTTTCCAAGAACAATTAGCTGTTAGTTCACCTTATAGGAACTCATTCAATAAAGCAGCACAGTCACCTAATAACAAATCTGGAACGGTTAATAGAAGCATTTCGATTACGTCTGTCGTCACTCCTAGGACGCCTTTGATGGCATCTCCAGGTCCTGCTGGTGAGGATGATTTTGATGAAATCATTTACAGGAAAGTTGAATTAAGTAAAGGCAAGCGAAAGAGACTAACGACTAAGGTTTTGATTGAATTGTTCGTGTTTGTGTGCATTGCGGGTAGCTTGGTGGCTAGCTTAACTATTGAGGAACTGAGAAGGACACAGATTTGGAGTTTAGCGCTTTGGAGGTGGTGTATGCTTGCGATGGTGACCTTTTGTGGCATGTTAGTTACCAAATGGTTCATGCACATTGTTGTTTTCTTGATTGAAATGAACTTCTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGACTGAAGAAATGTGTTCAGGTTTTCATTTGGATCGGTTTGGTTCTTCTCACATGGGTGCTTTTTATCAATCGCGGGGTTGAAAGATCTAAATTGGCAGCAAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCCCTTCTCATAGGAGCATTTTTGTGGGTTATAAAGACATTGTTGCTTAAGATTTTGGCATCGAATTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCAATCTTCCATCAGTATGTTCTGCAGACTCTCTCCGGGCCTCCACTTATGGAAGAGGCTGAGAAAGTCGGTGGATCTCAAAGTATAGGCCATTTTAGTTTCAGGAGTACAATTGGTAAAGGTGGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCACAGGATGAAGCAAGAGAAAGTTTCCTCGTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAACTTTTTATGATGTAGACAATGAACAAACTGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACATTTTCAGGAATGTTGCTGCTTCCCCTAGTTGCAAGGACATCGATGAGGATGAACTACGTCGATTCATGATTAAGGAAGAAGTTCCTTTCGTATTTCCCCTACTGGCACAGCCAGAGACAGGGGTAATCACCAGAAAGTCTCTAGCAAATTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCACACGCCTTATGCGATACTAAAACAGCTGTTAAACAATTAAACAAGCTCGTGACAGGAGTCCTAGCACTGGTGACCATAGTAGTATGGCTTCTTCTGATGGAGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCACAGCTGGTACTTGCAGCTTTCATGTTTGGAAACACATGCAAGAATATATTCGAAGCCATCATCTTTGTTTTTGTAATGCACCCATTTGATGTCGGTGATCGATGTGTTATAGATGGTGTTGAGCTACTGGTTGAAGAAATGAATATACTGACAACAGTATTCTTGAAGCTTAGCAATGAAAAGCTGTATTATCCAAACTCTGTCCTCGCCACAAAACCAATTAGCAATTATTACAGAAGCCCAAATATGGGTGACAGTGTAGAGTTCTCGGTTGATTTTACGACACCAGTAGAGAAAATTGGAGCACTAAAAGAAAAAGTAAAGAGGTACTTGGAGAAGAATCCACAATACTGGCATCCTAATTTTGGCTTGGTAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTGTTTATGTGACTCACACAATGAACTTTCAAGAATTTGCGGAGAAGAACAAGCGGAGAAGTGAACTAGTGATGGAAGTAAAGAAAATATTTGAAGAGCTCAATATCAGATACAACCTTATTCCACAAGGTGTTCATCTCAGACACATCGAATCTGATACGAGTTATGTCAGATGA 2319 0.3984 MDGNKHHQGGEVSMTEKKREEVVVAISNVGGETHYNDHDHELKGVEYSPRYASKSPPLNCASPEIRFIPSPNKPPKIPTTNENLTPRKNLARSVYSKPKSRFGEQPYPIDETLLEENVTSTFQEQLAVSSPYRNSFNKAAQSPNNKSGTVNRSISITSVVTPRTPLMASPGPAGEDDFDEIIYRKVELSKGKRKRLTTKVLIELFVFVCIAGSLVASLTIEELRRTQIWSLALWRWCMLAMVTFCGMLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKKCVQVFIWIGLVLLTWVLFINRGVERSKLAAKILDGVTWTLVSLLIGAFLWVIKTLLLKILASNFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSIGHFSFRSTIGKGGTKKEVIDMAKLHRMKQEKVSSWTMKILVDAVMNSRLSTISNSLDETFYDVDNEQTDKEITNEMEATAAAYYIFRNVAASPSCKDIDEDELRRFMIKEEVPFVFPLLAQPETGVITRKSLANWVLKVYQERRALAHALCDTKTAVKQLNKLVTGVLALVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLSNEKLYYPNSVLATKPISNYYRSPNMGDSVEFSVDFTTPVEKIGALKEKVKRYLEKNPQYWHPNFGLVVKEIENVNKIKMGVYVTHTMNFQEFAEKNKRRSELVMEVKKIFEELNIRYNLIPQGVHLRHIESDTSYVR* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0770 772 SUPERFAMILY Sm-like ribonucleoproteins 595 654 IPR010920 -
Tpr7g0770 772 Gene3D - 605 654 IPR023408 -
Tpr7g0770 772 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 18 761 IPR016688 -
Tpr7g0770 772 PIRSF Memb_At2g17000 3 772 IPR016688 -
Tpr7g0770 772 Pfam Mechanosensitive ion channel 546 751 IPR006685 GO:0016020|GO:0055085
Tpr7g0770 772 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 18 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0770 Tpr-Chr7 6817859 6821574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0770 43 761 Mechanosensitive Ion Channel Family AT5G12080 59.336 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0770 K22048 - gmx:100803107 1183.32