Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0766 ATGGATGGTAATAAGCATCATCAAGGTGGTGAAGTAAGCATGATTGAGAAGAAAACAGAACAAGTGGTGGTGGCAATTTCAAATGATCATGACCATGATCATGAGTTCAAAGGGATTGAATCTTCACCTCGCTACGCTTCAAAGTCACCACCTTTTAACTGTGCTTCTCCTGAGATAAGATTCATCCCTAGCCCAAATAAACCCCCTAAAGTTCCCACTACAAATGAAAATCGTACTCCAAGAAAAAATCTTGCAAGATCAGTGTATTCCAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGGAACCCTTTTTGAAGAGAATGTTACTTCACCACATAGGAACTCATTACATTCACCGAATAACAAATTTGGAACGGTAAATAGAACTGTTTCAATTACTTCTGTCGTCACTCCTAGAACACCTTTTTTGGCTTCTCCAGGTCCTGCTGGTGAAGATCCCGATGAAATCATTTACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGACTAACAACTAAGGTTTTGATTGAATCGTTCGTGTTTGTGTTCATCGCGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAAAAGGACAAAAATTTGGAGTTTAGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACCTTTTGTGGCATGTTAGTTACCAAATGGTTCATGCACATTGTTGTTTTCTTGATTGAAATGAACTTCTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGATTGAAGAAATGTGTCCAGGTTTTCATTTGGATTGGTTTGGTGCTTCTCACATGGGTGCTTTTTATCAATCGCGGGGTCCAACGATCTAAATTGGCAGCAAAGATTTTAGATGGTGTAACATGGACTCTTGTTTCACTTCTCATTGGAGCATTTCTGTGGCTCATAAAAACAACGTTGCTAAAGATTCTGGCGTCAAATTTCCACGTCAAATCTTTCTTTGATCGAATTCAAGAATCGATCTTCCATCAATACGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGAAGAGGCTGAGAAAGTCAATGGAACTCAAAGTATTAGCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCATAGGATGAAGCAAGAGAAAGTTTCCTCGTGGACTATGAAGATTTTAGTAGATGCAGTGATGAATTCGAGGCTGTCCACAATCTCTAATTCACTAGATGAAACTTTTTATGATGTAGACAACGAACAAAATGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATGTTGCTGCTTCCGCTAGTTGCAAGGACATCGATGAGAATGAACTTCGTAGGTTTCTGATTAAGGAAGAAGTTCCTTTGGTATTTCCACTACTGGCACAGGCAGAAACTGGGCTAATTACCAGAAAATCTTTAGCAGATTGGGTGTTAAAGGTATATCAAGAACGTAAAGCACTGGCGCATGCATTAAGCGACACCAAAACAGCTGTTAAACAATTAAACAAGCTTGTGACAGTGGTTCTAGTAGTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACAACAAAAGTACTTGTGTTCCTGTCATCTCAGCTAGTACTTGCGGCTTTCATGTTTGGAAATACGTGCAAGAATATATTCGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTTGATGTTGGCGATCGGTGTGTTATAGATGGCATTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTATTCTTGAAACTTAATAATGAAAAGGTGTACTATCCAAACTCTGTCCTAGCCGTAAAACCGATCAGCAATTATTACAGAAGCCCTAGTATGGGCGACACCGTAGAGTTCTCGGTTGATTTTATGACACCAGCAGAGAAAATTGGAGCACTGAAAGAAAAAGTAAAGAGGTATTTGGAGAGAAATCCACAACATTGGTATCCTAATTTTGGTTTGGTAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATAAACTTTCAAGAGTTTGGAGAGAAGACGAAGCGGAGAAGTGAACTAGTGATGGAAGTAAAGAGAATATTTGAAGAGCTCAATATAAGATACAACCTTATTCCACAAGGTGTTCATCTCAGACACTTGGAACCTGATACAAGTTATCTCAAATCATGA 2259 0.3887 MDGNKHHQGGEVSMIEKKTEQVVVAISNDHDHDHEFKGIESSPRYASKSPPFNCASPEIRFIPSPNKPPKVPTTNENRTPRKNLARSVYSKPKSRFGEQPYPIDGTLFEENVTSPHRNSLHSPNNKFGTVNRTVSITSVVTPRTPFLASPGPAGEDPDEIIYKKVEFSKGKRKRLTTKVLIESFVFVFIAGSLLASLTVEELKRTKIWSLGLWRWCMLVMVTFCGMLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKKCVQVFIWIGLVLLTWVLFINRGVQRSKLAAKILDGVTWTLVSLLIGAFLWLIKTTLLKILASNFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVNGTQSISHFSFRSTTSKGSTKKEVIDMAKLHRMKQEKVSSWTMKILVDAVMNSRLSTISNSLDETFYDVDNEQNDKEITNEMEATAAAYYVFRNVAASASCKDIDENELRRFLIKEEVPLVFPLLAQAETGLITRKSLADWVLKVYQERKALAHALSDTKTAVKQLNKLVTVVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGIELLVEEMNILTTVFLKLNNEKVYYPNSVLAVKPISNYYRSPSMGDTVEFSVDFMTPAEKIGALKEKVKRYLERNPQHWYPNFGLVVKEIENVNKIKMGLYVTHTINFQEFGEKTKRRSELVMEVKRIFEELNIRYNLIPQGVHLRHLEPDTSYLKS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0766 752 PIRSF Memb_At2g17000 4 752 IPR016688 -
Tpr7g0766 752 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 46 740 IPR016688 -
Tpr7g0766 752 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 46 740 - -
Tpr7g0766 752 Pfam Mechanosensitive ion channel 524 730 IPR006685 GO:0016020|GO:0055085
Tpr7g0766 752 SUPERFAMILY Sm-like ribonucleoproteins 574 633 IPR010920 -
Tpr7g0766 752 MobiDBLite consensus disorder prediction 59 85 - -
Tpr7g0766 752 Gene3D - 584 633 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0766 Tpr-Chr7 6806741 6810349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0766 41 740 Mechanosensitive Ion Channel Family AT5G12080 59.181 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0766 K22048 - gmx:100777617 1116.29