Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0747 ATGGGTGGTGAGGGTAGAGTTGAAGTTGTGAGTGGAAAAGGGTGTTCAAGGTTGTTTTCATCTTCATTCAGAGGTCTTCAGCCATTGGAGCAAATGTCTTCTGTTTCATCCTCGCCGCAAGTGTCATCAAATGCTCCTTTTGCTGGTCTTGTTATATGTGTTACTGGTTTATCGAAAGAAGCAAGGAATCAGGTCATGGAGGCTACAGCGAGATTAGGTGGCCAGTATAGTCCTAATCTGCATCCTCAATGTACTCATTTGGTGGTTCAGAACTTTGGTGGACGCAAATTCGAGCATGCGTTGAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGATAGTGTCAGGAAAAATGTAAGGTTGACTGAATCACTTTATAGTTTGAAGAGTCATGGAGATAACAATATGCACTTGGATGATTTTAGACTGCTTCCCGGTTATACAAATGCTGGTAATTGTCTTCCTGCAAAAATCCATGAGATCAAGCATACTCATCATGCTGAAGAATTACGAAGATTCTCTGGGAGAGAGTCTAACAGAAGTCTGGACTCAACTCTGTCTGGTTGCTCCATCTATGTTGATCCAAGCATTTCATCCGAATTGCAAAACAAGGTTGTTGAGGCTGCCTCAAGAGAAGGTGCTAGTTTTGTGGAACAATGGTTTGTTGGCTGCAATGTTAGTCATGTAGTGACTGAAGGGACATCCATTCAAAGATATCTTGGATACTCTAGTAACCTCATTACACCACTGTGGATTCTCAAAACAGCTAAGGAGAAACAAGTGCAAAGGCTTGTTAACATGTCTGTTGATTTGGCAAGACAAGTTGGCTCGATGCTTGAAGATGTTCATAATGGCATTTCAGGGAAGGAAGCAGTAAAGCCAAAAGTCCTTGACGAAGTTGGTTACAAAGAAAGGCAACAAATAGTAAATTCAGCAAAAAATGGTGTCAGAAGTCGCCGTGGTCGTCGAATGCAGACATGTCAGACTCCAATCCGTCCGATAACACCTAACAACCTTCTGGACTCTATCTGCTGGTCAATATCAGAAGCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGCTGAAGATCCTAATGAAAATCATACTTCAATATTTTTTGATGCAAAAGGGGATGGAAAGGATGCAGACGCTTCATTTTCGAACTCGACACGTCCTCTAACAGAAAGCGAGAAATCTGAGTTGATATTTAAAAACCATTTTCTTACCATACTCTTCCCAATCGACCGGTTTTCCGAGATTGGCCCTTCCACAAGAACGTTTTTTAGCCATAACGGTTTTACGTGTCTTCAGGTGTTGGATAATATCCATGCATTTTATCAGGAGAACATGCCAAGCCATGAAATAGAAGTGGCAATTCATACAGATTCAAGACATGCGGACAGACTCCGATCAGTGTACTCAAGTAAGGAAACAGCGGAGCGTGGGTATGTGATGTTCAAACGAATTGAATTTTTGGGTAGTCGTACAAGTTTTGAAATGTTGAAGCGTGTAAGTGGGGACAACAACTCCAACGTGTATGAGTTATTACTTAGGGCATAA 1584 0.4173 MGGEGRVEVVSGKGCSRLFSSSFRGLQPLEQMSSVSSSPQVSSNAPFAGLVICVTGLSKEARNQVMEATARLGGQYSPNLHPQCTHLVVQNFGGRKFEHALKHGAKNGLFVVTLGWFVDSVRKNVRLTESLYSLKSHGDNNMHLDDFRLLPGYTNAGNCLPAKIHEIKHTHHAEELRRFSGRESNRSLDSTLSGCSIYVDPSISSELQNKVVEAASREGASFVEQWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKQVQRLVNMSVDLARQVGSMLEDVHNGISGKEAVKPKVLDEVGYKERQQIVNSAKNGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEATSTASIYTDSFSAEDPNENHTSIFFDAKGDGKDADASFSNSTRPLTESEKSELIFKNHFLTILFPIDRFSEIGPSTRTFFSHNGFTCLQVLDNIHAFYQENMPSHEIEVAIHTDSRHADRLRSVYSSKETAERGYVMFKRIEFLGSRTSFEMLKRVSGDNNSNVYELLLRA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0747 527 ProSiteProfiles BRCT domain profile. 42 134 IPR001357 -
Tpr7g0747 527 ProSiteProfiles BRCT domain profile. 187 275 IPR001357 -
Tpr7g0747 527 Gene3D BRCT domain 45 136 IPR036420 -
Tpr7g0747 527 Pfam twin BRCT domain 50 116 IPR001357 -
Tpr7g0747 527 CDD BRCT_TopBP1_rpt2_like 46 124 - -
Tpr7g0747 527 SUPERFAMILY BRCT domain 41 135 IPR036420 -
Tpr7g0747 527 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 527 - -
Tpr7g0747 527 SMART BRCT_7 189 265 IPR001357 -
Tpr7g0747 527 SMART BRCT_7 44 124 IPR001357 -
Tpr7g0747 527 Pfam Family of unknown function (DUF6699) 351 511 IPR046522 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0747 46 134 Core DNA Replication Machinery Family AT1G77320 37.079 2.23e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0747 - - gmx:100815253 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0747 7 6652841 6657271 Tpr7g0747 7 6652841 6657271 ECH