Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0744 ATGGCGGATGTTATGGTAATGAAAGAGCTTGAAGACAAAGCCTCGCATCTCGGAATCGATCTATCCACCATAGATCTTGATTCCATTCACCTCCCACCTGGTAACGACTGTGGAATCATCAGTGATGATGAGGATGTTCTTCGAGAGGAAAATTCTGGTTCGTTTGATACTGGTTTTGGGAACATTATAGTAGTGGACAATCTTCCCGTTGTTCCGAAGGAAAAGTTTGAAAAGCTTGAAGGCGTTGTTCGCAAAATTTACAGTCAGATTGGTGTTATCAAGGATGGTGGTCTCTGGATGCCTGTTGATCCTGCCACCGGAAAGTCGTTAGGCTACTGCTTTATTGAGTACAATACTCCTCAGGAAGCTGAGCTTGCTAAAGAGAAGACTCATGGATACAAATTGGATCGTTCTCACATATTTGCTGTGAGTATGTTTGATGATTTTGATCGGTTCATGAATGTGCCTGATGAATGGGCTCCTCCACCGATCAAGGAATATACTCCAGGGGAAAATCTCCAACAATGGCTTACCGATGCTAAGGGCCGAGACCAGTTTGTGATGCGTGCTGCTAGTGATACCGAGGTTTTCTGGAATGATGCTAGACATTTAAAACCCGATCCTGTCTACAAACGTGCATACTGGACTGAGAGTTTCGTACAATGGTCACCTCTGGGCACATATTTGGCAACAGTTCACCGGCAGGGTGCAGCAGTCTGGGGAGGTGCTACAACCTTCAATCGTCTCATGCGTTACGCTCATCCTCAGGTAAAGCTTATTGACTTTTCACCTGGTGAGAAGTATTTGGTAACTTATAGCAGCCATGAACCAAGCAACCCTCGAGATGCTAATAGGGTTGTTATAAATATATTTGATGTGAGGACTGGTAAAGTGATGAGAGACTTTAAAGGAAGTGCTGATGATTTTGCTGTTGGAGGTACCGGGGGTGTCACGGGAGTGTCATGGCCTGTATTCAAATGGAGTGGCGGAAGGGATGACAAGTACTTTGCAAGGATGGGGAAAAATGTACTTTCTGTATATGATACGGAATCATTTTCTCTTGTTGACAAAAAATCCATAAAGGTTGAAAATATAATGGATTTCAGCTGGTCACCAACTGATCCAATCATTTCACTGTTTGTTCCTGAGACAGGAGGTGGTAACCAGCCAGCTAGGGTAAGTCTTGTTCAAATCCCCAGCAAAGAAGAACTCAGGCAAAAGAACCTTTTTAGTGTCAGTGACTGCAAGATGTACTGGCAGAGCAATGGGGATTACCTTGCTGTTAATGTAGATCGATATACCAAAACAAAGAAAAGCACTTACACAGGCTTTGAGCTTTTCCGTATAAAGGAACGTGACATACCCATTGAAGTTCTGGAGCTTGAGAATAAGAATGATAAGATCATTGCATTTGCTTGGGAGCCAAAGGGACATAGGTTTGCTGTTATTCACGGTGATATGCCTAAGCCTGATATTAGTATCTACTCTATGCGCACTGCTCAGAACACTGGCCGAGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAGGCAAATGCTTTGTTCTGGTCACCTGCAGGTCGCTTCATTGTACTAGCAGGGTTGAAAGGAATGAACGGATTGTTGGAATTTTACAATGTTGATGATCTAGAAACCATGGCCAATACTGAACATTTTTATGCAACTGATGTTGAATGGGATCCAACCGGAAGGTATGTTGCAACTGCTGTGACTCATCATGATATGGAAAATGGATTCAATATATGGTCTTTCAATGGCAAACATCTGTATCGGATATTGAAGGATAGCTTATATCAGTTCTTATGGAGACCAAGACCAGCATCTTTCCTGACTGCTGAGAAAGAGGAAGAGATAGCAAAGAACTTGAAGAGGTATAGTAAGAAATATGAAGCAGAAGATCAAGATGTTTCATTGCTGTTGAGTGAGCAGGAGCAAGAGAAGCGCAGGATCTTGAAAGAAGATTGGGAGAAATGGGTTAATCAATGGAAGCAGTTGTATGAAGAAGAGAAGGCAAAGAGGCAAGAGCTGAGGGACGGAGAAGCTAGTGACGAGGAAGAAGAATATGAAGCAAAGGACATTGAAGTCGAGGAAGTAGTCGATGTTTCCAAAGAGATCCTTCACTTTGAGTATGGTCAAGAGTGA 2160 0.4296 MADVMVMKELEDKASHLGIDLSTIDLDSIHLPPGNDCGIISDDEDVLREENSGSFDTGFGNIIVVDNLPVVPKEKFEKLEGVVRKIYSQIGVIKDGGLWMPVDPATGKSLGYCFIEYNTPQEAELAKEKTHGYKLDRSHIFAVSMFDDFDRFMNVPDEWAPPPIKEYTPGENLQQWLTDAKGRDQFVMRAASDTEVFWNDARHLKPDPVYKRAYWTESFVQWSPLGTYLATVHRQGAAVWGGATTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAVGGTGGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYDTESFSLVDKKSIKVENIMDFSWSPTDPIISLFVPETGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDMPKPDISIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGMNGLLEFYNVDDLETMANTEHFYATDVEWDPTGRYVATAVTHHDMENGFNIWSFNGKHLYRILKDSLYQFLWRPRPASFLTAEKEEEIAKNLKRYSKKYEAEDQDVSLLLSEQEQEKRRILKEDWEKWVNQWKQLYEEEKAKRQELRDGEASDEEEEYEAKDIEVEEVVDVSKEILHFEYGQE* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0744 719 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 5 712 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tpr7g0744 719 Coils Coil 665 685 - -
Tpr7g0744 719 PIRSF Transl_init_eIF3b 6 713 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tpr7g0744 719 MobiDBLite consensus disorder prediction 677 696 - -
Tpr7g0744 719 PANTHER BNACNNG51870D PROTEIN 5 712 - -
Tpr7g0744 719 SUPERFAMILY RNA-binding domain, RBD 60 141 IPR035979 GO:0003676
Tpr7g0744 719 CDD RRM_eIF3B 60 143 IPR034363 -
Tpr7g0744 719 Coils Coil 618 638 - -
Tpr7g0744 719 Pfam Eukaryotic translation initiation factor eIF2A 407 606 IPR013979 -
Tpr7g0744 719 Gene3D - 56 155 IPR012677 -
Tpr7g0744 719 Gene3D - 190 447 IPR015943 GO:0005515
Tpr7g0744 719 SUPERFAMILY DPP6 N-terminal domain-like 218 595 - -
Tpr7g0744 719 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 55 713 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tpr7g0744 719 Gene3D - 448 709 IPR015943 GO:0005515
Tpr7g0744 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 61 148 IPR000504 GO:0003723
Tpr7g0744 719 SMART rrm1_1 62 144 IPR000504 GO:0003723
Tpr7g0744 719 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 83 138 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0744 Tpr-Chr7 6612526 6616854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0744 5 713 Eukaryotic Initiation Factors Gene Family AT5G27640 75.105 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0744 K03253 - gmx:100817394 1286.94