Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0740 ATGGATATTAATCAAGTCACCACTCATCAAATTAAAACTTCATCATCATCATCTTCTACTTTAAGTGGCAATAATAAGAAGTACAAAGGAGTAAGATTAAGAAAGTGGGGAAAATGGGTGTGTGAAATAAGGCTACCAAATAGCCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAAAAAGCAGCTAGAGCATTTGATGCTGCACTTTATTGTCTTCGTGGTCCTAATGCAGCTTTCAATTTTCCTGATACGCCTTTCAATTTGGATATCAATGTGGCTAGTAACAATTCTCTTACTCATCAAGAGATTAGAGAGATTGCTGCTAATTTTGCCAACAAAAATTTACCTATTGTTATTGATAATAATAATAACAATGTTAATATTAATAATAATGGTAATGGTAATGTTGGTAATGGTAATGTTGATGAATCCAATATTGTGAAGGAAATTAGTGGCTCTTCATCTTCTACTATGAATGTCAATGGGAACATGATTGATTGGACATTTTTGAACATGTTGGATGGTTCAAGTGATAATGTTGGGACTGAAAATTATGGTGGTTTCTATTCCGACTTAGAAAAGATGCACTCCGGTGAGTTATTGTATTCCATTCCACCACCATTTTTTGAAGATTATAATCATCAGAACGAAATTGTTGATGATGATAATGACGATCCTTTTTCTCATCAGTCATTCCTTTGGAACTGGAACTTTTGA 723 0.3361 MDINQVTTHQIKTSSSSSSTLSGNNKKYKGVRLRKWGKWVCEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGPNAAFNFPDTPFNLDINVASNNSLTHQEIREIAANFANKNLPIVIDNNNNNVNINNNGNGNVGNGNVDESNIVKEISGSSSSTMNVNGNMIDWTFLNMLDGSSDNVGTENYGGFYSDLEKMHSGELLYSIPPPFFEDYNHQNEIVDDDNDDPFSHQSFLWNWNF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0740 240 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 CDD AP2 26 86 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 240 - -
Tpr7g0740 240 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Tpr7g0740 240 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g0740 240 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Tpr7g0740 240 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Tpr7g0740 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 12 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0740 Tpr-Chr7 6575054 6576088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0740 22 238 AP2-EREBP Transcription Factor Family AT1G19210 42.727 2.85e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g0740 AP2 6.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0740 - - mtr:MTR_3g105510 284.648