Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0734 ATGGTGAAGATGAATAATCCCTCAATTATGATATTCATGGTTATAATAACAAATATGTTGGGTGGTGGAATGACACAAATTAAGAATGAGAGTAGTGTTGTTGTCAAAGTTGGAGCTGTACTTGATGTTAGCAACGGAACATTTGGGAAGATAGGATTGAGCTGCATCAACATGGCTCTCTCAGATTTTTATGACTCTAATTCTCATCACAAAACCAGAATCCAAATCATCGTCAGAGATTCATATATGGACGTTGTTACTGCCGCCGCACACGCTTGGGATCTCATAAAAAATGAGGAAGTGCAAGCCATCATGGGACCAAGATCAACAATGGAAGCAAATTTTGTGATTCAACTAGGAGACAAAGAACAAATCCCCATTGTAACTTTTTCAGCAACAAGCCCTTCACTTGCATCACTTCAAAGTCCATACTTTTTCCAAATATCACAAACCGATTCAGCTCAAGTAAAAGTCATCACCACAATTATCCAAGCTTTTGGTTGGAAACAAGTTGTCCCCATTTACATAGACAATAGTTTTGGTGAGGGACTCGTATCTGTTCTTCAACAAGCTTATATCCACGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACAGAGGATGATATAACTCGAGAGCTTTATAAAATAATGACTACTATATCCACTAGAGTATTTATTGTTCACATGTCCCCAAATCTTGGGTCTAAACTTTTTACCTTAGCAAAACAAATAGGGATGATGAGTCAAGGCTATGTTTGGATAGTAACCGATAGTATGACTAATTTATTCAATTCATTGGATTTTAATGTGAGGGAATCAATGGAAGGAGTATTGGGTGTTAGGACTTATATTCCAAAAACAAATAAGCTAGATGATTTTGGAGTTAGATGGAAAAGAAAATTCATAAGGGACAATCCAACACTTGTTGACATAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAAGTTGGAATTGGAAACACAAAATTTGGCTACAAATTGAGTGAAGCTTTGTCAAACACTAGATTTAATGGTCTTAGTGGTGATTTCAAAGTTGTTGATGGGAAGTTACAAACACCAATATTTGAGATAATTAATGTGATTGGTCATGGAGAAAAGAGGGTTGGATTTTGGACACCATATAAAGGGTTGACTAAAAATTTGGACAAACACGACATGAGCAATAATAACATATATTCTAGTTCTAAAAATGATATTGGATCAATCATATGGCCAGGGTATTTGTACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAGTTGAAGATAGGTGTTCCAATTAAAAGTGGAGATAATAACTACACTGAATTCTTGAAAGTAACATATGATCATAGTACCAATACAACACAAGCCACTGGCTTCTGCATTGATGTCTTCCTAGCTGTGTTGAAAATTTTGCCTTATGACTTGCCACATGAATTTGTTCCATATGCAAACCATGAGGGTCAAATGGCAGGAACATACGATGACTTGATCTCTCAACTTTATCATGGGACGTATGATGCAGTAGTGGGGGATGTAACAATCATTGCAAACAGATCCAACAAAGTTGATTTCACAATGCCATACACAGAATCTGGCGTGACAATGGTTGTTTCAATGAAAGACAGCAGGAAGAAAAATGCATGGGCTTTTTTGAAGCCATTGACATGGGATCTTTGGGTAACATCAGGTTGTTCATTTGTATTCATTGGATTTGTTGTATGGGTTCTTGAACATCGAATAAACAACGACTTTAGAGGACCACCCTCTCATCAGATTGGTACAAGCTTATGGTTTTCCTTTTCAACTATGGTCTATGCTCACAGAGAGAAATTAGTGAGCAACTTGAGTAGATTTGTGGTGGTTGTATGGATTTTTGTGGTTCTAATTCTAGTTCAAAGTTACACTGCAAGCTTGACTTCACTCTTAACAGTTGAACAACTCAGTCCAACTATTACCGATGTTAAGCAACTTCTAAAGAATAAGATGAATGTTGGCTATATCAAAGGTTCTTTTGTTCATGGAATTTTGAAGGACTTGGGTTTCTCAGATTCTCAGCTCAAGACTTATCAATCACCTGAAGAATGTCATGAGCTTTTCATAAAAGGAAGTTTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCACTTTCTTGGAACTTTTAGTTGCTCAAAGTATGTCATGGTTGAACCAAGATATAAAACCGGTGGTTTTGGCTATGCTTTTCCAAAAGGTTCACCTCTTGTGGCTGACATTTCAAAGGCAATCCTAAATGTGACTCAAGGAGACAAAATGAAAACAATTGAGAATGCATGGTTCAAGGAAGCTATTTGTCTAGATTCCAATACAGAAATTTCCTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTCATTGCAGGGATTGCTTCCCTATTAGCACTCCTAATCTTTGTGGTAACATTTCTATATCAGCACAAACATATTTTGTTAAATAATGATCCAAGTACTTCAATATGGCAACGAGTATGCATCTTGGTAAGGATATTTGATCAAAGAGACTTGGACTCTCACACATTCAAGAAAAGTGAAAATAAAATTGAAAGCATTAATACTCATCATGATGACGATTTAGGTGCAATTGAGGCTTCTCCAGGTACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCAGTTTATGGCGATTTTAGTCAAAACACAGAAATGGATGTGGTGCAAATTACTAATAAAGAAGTTGCTCCTGTGAACAACCGTGAAATTAACTCCCAAGCAACATGA 2862 0.3662 MVKMNNPSIMIFMVIITNMLGGGMTQIKNESSVVVKVGAVLDVSNGTFGKIGLSCINMALSDFYDSNSHHKTRIQIIVRDSYMDVVTAAAHAWDLIKNEEVQAIMGPRSTMEANFVIQLGDKEQIPIVTFSATSPSLASLQSPYFFQISQTDSAQVKVITTIIQAFGWKQVVPIYIDNSFGEGLVSVLQQAYIHVPYLSAISLSATEDDITRELYKIMTTISTRVFIVHMSPNLGSKLFTLAKQIGMMSQGYVWIVTDSMTNLFNSLDFNVRESMEGVLGVRTYIPKTNKLDDFGVRWKRKFIRDNPTLVDINLNIFGIWAYDATIALAMAIEKVGIGNTKFGYKLSEALSNTRFNGLSGDFKVVDGKLQTPIFEIINVIGHGEKRVGFWTPYKGLTKNLDKHDMSNNNIYSSSKNDIGSIIWPGYLYSIPKGWEIPTIGKKLKIGVPIKSGDNNYTEFLKVTYDHSTNTTQATGFCIDVFLAVLKILPYDLPHEFVPYANHEGQMAGTYDDLISQLYHGTYDAVVGDVTIIANRSNKVDFTMPYTESGVTMVVSMKDSRKKNAWAFLKPLTWDLWVTSGCSFVFIGFVVWVLEHRINNDFRGPPSHQIGTSLWFSFSTMVYAHREKLVSNLSRFVVVVWIFVVLILVQSYTASLTSLLTVEQLSPTITDVKQLLKNKMNVGYIKGSFVHGILKDLGFSDSQLKTYQSPEECHELFIKGSLNGGIDAAFDEVPYVKHFLGTFSCSKYVMVEPRYKTGGFGYAFPKGSPLVADISKAILNVTQGDKMKTIENAWFKEAICLDSNTEISSNNNLGLESFWGLFLIAGIASLLALLIFVVTFLYQHKHILLNNDPSTSIWQRVCILVRIFDQRDLDSHTFKKSENKIESINTHHDDDLGAIEASPGTHCPPSPSSQTESNVSVYGDFSQNTEMDVVQITNKEVAPVNNREINSQAT* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0734 953 Pfam Ligand-gated ion channel 796 827 IPR001320 GO:0015276|GO:0016020
Tpr7g0734 953 Gene3D - 444 563 - -
Tpr7g0734 953 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 892 - -
Tpr7g0734 953 PANTHER GLUTAMATE RECEPTOR 2.9 35 892 - -
Tpr7g0734 953 PIRSF IGluLR_plant 3 935 IPR017103 -
Tpr7g0734 953 Gene3D - 313 443 - -
Tpr7g0734 953 CDD GluR_Plant 441 794 - -
Tpr7g0734 953 Gene3D - 564 695 - -
Tpr7g0734 953 SUPERFAMILY Periplasmic binding protein-like I 34 435 IPR028082 -
Tpr7g0734 953 Gene3D - 699 801 - -
Tpr7g0734 953 SUPERFAMILY Periplasmic binding protein-like II 421 796 - -
Tpr7g0734 953 CDD PBP1_GABAb_receptor_plant 36 400 IPR044440 -
Tpr7g0734 953 Pfam Receptor family ligand binding region 55 380 IPR001828 -
Tpr7g0734 953 Pfam Bacterial extracellular solute-binding proteins, family 3 470 795 IPR001638 -
Tpr7g0734 953 SMART GluR_14 444 796 IPR001320 GO:0015276|GO:0016020
Tpr7g0734 953 Gene3D - 153 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0734 Tpr-Chr7 6511570 6517666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0734 3 915 Ion Channels AT2G29120 48.360 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0734 K05387 - tcc:18587654 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0734 7 6511570 6517666 Tpr7g0734 7 6511570 6517666 ECH