Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0733 ATGATGAAGAAGGATAATCCAATTAGCTTTATTTACTTTGTCATATTTATAGTTACTTGTTGGTGTGTTCTGTTGGGTGGAATGGCACAAACTAGAAATGAGAGTAGTGTTGTTGTCAAAGTTGGAGCTGTACTTGATGTTACCAATGGAACGGTTGGGATAATAGGATTGAGCTGCATCAACATGGCCCTCTCAGATTTCTATCACTCTCATTCTCATCACAAAACCAGAATCCAAATTATCGTTAGGGATTCTCACAAGGACGTCGTCACTGCCGCCGCACAAGCTCTGGATCTCATAAAAAATGAGGAAGTGCAAGCAATCATGGGACCAATAACCACAATGGAAGCAAATTTTGTGATTAAACTAGGAGATAAAGCACACATACCCATTGTAACATTTTCAGCAACAAGCCCTTCACTAGCATCACTTCAAAGTCCATACTTTTTCCAAATATCACAAATTGATTCAGCTCAAGTTAAAGCAATCACCTCAATTGTACTAGCTTTTGGATGGAAACAAGTTGTCCCAATTTACATAGACAATAGTTTTGGTGAAGGACTCGTACCTTATTTAACCAATGCTCTTCAACAAGCCAATATCCAAATTCCTTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTCAAGAGCTTTATAAAATAATGACTACTATACCTACTAGAGTATTTATTGTGCACATGACACCAAATCTTGGCTCTAAGCTTTTTGCCATGGCAAAAAAAATTGGGATGATGGGTGAAGGCTATGTTTGGATAGTAACCGATAGTATGGCTAATTTGTTCAATTCATTGAATTTTAATGTGTGGGAATCAATGGAAGGAGTAATTGGTGTGAGGACATATATTCCTAGAACTAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTTGTTGACATGAATTTGAGCATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAATGTTGGAATTGGAAACACAAAATTTGGCTACAATAACACATCAAACAATTATTATATGCCAAATTTTGAAAAGTTTGCTATTTCACAAAATGGTGAGAAATTGAGGGAAGCTTTGTCAAACACTAGCTTTAATGGTCTTAGTGGTGATTTCAGTGTTGTTGATGGGAAGTTACAAGCATCAATATTTGAGATAATTAATGTGATTGGTAATGGAGAAAAGAGGGTTGGATATTGGACACCAAATAAAGGGTTGACTAGAAAATTGGACACAAAAGGCCTAATGAGCAATAATAGCACATATTCTAGTTCTAAAGATGATCTTGGATCAATCATATGGCCAGGGGATGTGTACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAGTTGAGGATAGGTGTTCCAATTAAAAAAGGAGATAATTACATTGGATTCCTGAGAGTAACATATGATAATAGTACCAATAAAACAGATGCCACTGGATTCTCTATTGATATCTTCAAAGCTGTGGTGGATGTTTTGCCTTATGCTTTACCTTATGAATTTTTTCAATTTGCAAAGCCTAATGGTGAAATGGCAGGAAACTACAATGACTTAATTGCTCAAATTTATTATGGGAAGTATGATGCAGTAGTGGGGGATGTAACAATCACCGCTAACAGATCCAACTATGTCGATTTCACAATGCCATACACAGAATCTGGTGTATCAATGGTTGTTTCAACGAAAGACAACAGGAGGAAAAATGCATGGGCTTTTTTGAAACCACTGTCATGGGGTCTTTGGGTAACATCAGCTTGCTCATTTGTATTCATTGGATTTGTTGTATGGATTCTTGAACATAGAATAAACAACAATTTCAGAGGACCACCCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTCTCAACTATGGTCTATGCTCACAGTAAAGAAGTAGTGAGCAACTTGAGTAGATTTGTGGTGGTTGTGTGGATTTTTGTGGTTCTAATTCTAGTTCAAAGTTACACTGCAAGCTTGACTTCACTCTTAACAGTTGAACAACTAAGGCCAACTATTACAGATGTTAACCAACTTCTAAAGAATAAAATGAATGTTGGCTATATCAAAGGTTCTTTTGTTTATGGAATTTTGAAGGACTTGGGTTTCCCAGACTCTCAGCTCATTACTTATCAATCACCTGAAGAATGTCATGAGCTTTTCCTAAAAGGAAGTGTAAATGGTGGCATTGATGCAGCTTTTTTTGAGATTGCCTATATTAAACACTTTCTTGGAACCTACAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATATAAAACCGGCGGTCTTGGCTTTGCCTTTCCAAAAGGTTCGCCTCTTGTAGCTGACATTTCTAGGGCAATTCTAAATGTGACTCAAGGAGGCAAAATGAGAACAATTGAGAATACATGGTTCAAAGAACCTAGTTGTCTACTTTCTAATTCAGAAATGTCCTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTCATTGCAGGGATTGCTTCCCTATTAGCACTCCTAATTTTTGTGGTAACATTTCTATATCAGCACAAACATATTTTGTTAAACAATGATCCGAGTACTTCAATATGGCAACGAGTATGCATCTTGGTAAAGATATTTGATCAAAGAGACTTGGACTGTCACACATTCAAGAAAAGTGAAAATAAAATTGAAAGCAGTAATACTCATCATAATAATGATTTAGGTGCAATTGAGACCTCTCCAGGTACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCGGTTTATGACGATTTTAGTTTTAGTCCCAACACAGAAATAGATGTTGTGCAAATAACTTATCAAGAAGTTGATCTTGTGAACAACCGTGAAATTAACTCCCGAGCAACATGA 2958 0.3651 MMKKDNPISFIYFVIFIVTCWCVLLGGMAQTRNESSVVVKVGAVLDVTNGTVGIIGLSCINMALSDFYHSHSHHKTRIQIIVRDSHKDVVTAAAQALDLIKNEEVQAIMGPITTMEANFVIKLGDKAHIPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIVLAFGWKQVVPIYIDNSFGEGLVPYLTNALQQANIQIPYLSAISLSATDDAITQELYKIMTTIPTRVFIVHMTPNLGSKLFAMAKKIGMMGEGYVWIVTDSMANLFNSLNFNVWESMEGVIGVRTYIPRTKKLDDFRVRWKRKFISDNPTLVDMNLSIFGIWAYDATIALAMAIENVGIGNTKFGYNNTSNNYYMPNFEKFAISQNGEKLREALSNTSFNGLSGDFSVVDGKLQASIFEIINVIGNGEKRVGYWTPNKGLTRKLDTKGLMSNNSTYSSSKDDLGSIIWPGDVYSIPKGWEIPTIGKKLRIGVPIKKGDNYIGFLRVTYDNSTNKTDATGFSIDIFKAVVDVLPYALPYEFFQFAKPNGEMAGNYNDLIAQIYYGKYDAVVGDVTITANRSNYVDFTMPYTESGVSMVVSTKDNRRKNAWAFLKPLSWGLWVTSACSFVFIGFVVWILEHRINNNFRGPPSHQIGTSLWFSFSTMVYAHSKEVVSNLSRFVVVVWIFVVLILVQSYTASLTSLLTVEQLRPTITDVNQLLKNKMNVGYIKGSFVYGILKDLGFPDSQLITYQSPEECHELFLKGSVNGGIDAAFFEIAYIKHFLGTYSCSKYVMVEPRYKTGGLGFAFPKGSPLVADISRAILNVTQGGKMRTIENTWFKEPSCLLSNSEMSSNNNLGLESFWGLFLIAGIASLLALLIFVVTFLYQHKHILLNNDPSTSIWQRVCILVKIFDQRDLDCHTFKKSENKIESSNTHHNNDLGAIETSPGTHCPPSPSSQTESNVSVYDDFSFSPNTEIDVVQITYQEVDLVNNREINSRAT* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0733 985 SMART GluR_14 475 826 IPR001320 GO:0015276|GO:0016020
Tpr7g0733 985 SUPERFAMILY Periplasmic binding protein-like II 451 827 - -
Tpr7g0733 985 Gene3D - 729 831 - -
Tpr7g0733 985 CDD PBP1_GABAb_receptor_plant 40 430 IPR044440 -
Tpr7g0733 985 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 923 - -
Tpr7g0733 985 Gene3D - 366 473 - -
Tpr7g0733 985 PANTHER GLUTAMATE RECEPTOR 2.9 39 923 - -
Tpr7g0733 985 Pfam Bacterial extracellular solute-binding proteins, family 3 500 825 IPR001638 -
Tpr7g0733 985 Gene3D - 474 594 - -
Tpr7g0733 985 Pfam Receptor family ligand binding region 59 411 IPR001828 -
Tpr7g0733 985 PIRSF IGluLR_plant 7 961 IPR017103 -
Tpr7g0733 985 CDD GluR_Plant 472 824 - -
Tpr7g0733 985 Gene3D - 595 721 - -
Tpr7g0733 985 SUPERFAMILY Periplasmic binding protein-like I 38 466 IPR028082 -
Tpr7g0733 985 Gene3D - 157 321 - -
Tpr7g0733 985 Pfam Ligand-gated ion channel 826 857 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0733 Tpr-Chr7 6505364 6510352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0733 2 945 Ion Channels AT2G29120 48.894 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0733 K05387 - tcc:18587654 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0733 7 6505364 6510352 Tpr7g0733 7 6505364 6510352 ECH