Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0732 ATGATATTAATCGTTATAATAACTTGTTGGTGTTTAAATATGTTGGGTGGTGGAATGGCACAAATTAGAAACGAGAGTAATGTTGTAGTGAAAGTTGGAGCTGTACTTGATATTAGCAATGGAACGGTTGGTATAATAGGATTGAGCTGCATCAACATGGCTCTCTCAGATTTCTATCACTCTCATTCTCATTACAAAACTAGAATCCAAATCATCCTTAGAGATTCTCATAAGGATGTTCTCACTGCCGGTGCACAGGCTCTGGATCTCATAAAAAATGAGAAAGTGCAAGCAATTATGGGACCAACAACAACAATGCAAGCAAATTTTGTGATTCAACTAGGAGACAAAGCACATGTCCCCATTGTAACCTTTTCAGCAACAAGCCCTTCACTAGCATCACTTCAAAGTCCATATTTTTTCCAAATATCACAAATTGATTCAGCTCAAGTTAAAGCCATCACCTCAATTATTCAAGCTTTTGGTTGGAAACAAGTTGTCCCCATTTACATTGACAATAGTTTTGGTGAAGGACTCATACCTTATTTAACCAATGCTCTTCAACAAGCCAATATTCAACTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTCAAGAGCTTTATAAAATAATGACTATTATATCCACTAGAGTATTTGTTGTTCATATGTCAACAAATCTTGGGTCTAAACTTTTTACCTTAGCAAAAAAAATTGGGATGATGAGTCAAGGCTATGTTTGGATAGTAACCGATAGTATGGCTAATTTATTCAGTTCATTTGATTTTACTGTGAAGGAATCAATGGAAGGAGTATTGGGTGTTAGGACTTATATTCCAAAAACAAATAAGCTAGATGGTTTTGGAGTTAGATGGAAAAGAAAATTCATTAGTCACAATCCAACTCTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAGGTTGGAATTGGAAACACAAACTTTGGTTACAATGAGAGCAACACATCAAGCAACTATTACATGCCTAATTTTGAAAAGTTTGGTATTGCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAAAACTAGATTTAAAGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGTTACAAGCACCAATATTTGAGATAATTAATATGATTGGCGATGAAGAAAAAAGGGTTGGATTTTGGACACCAAATAAAGGATTGGCTAGAAATTTGGACAGAAAAGGGCAAATTAGCAATAATATCATATATTCTACATCTAAAAATGATCTTGGTTCAATCATATGGCCAGGGGATGTGTACTCTATTTCAAAGGGATGGGAAATTCCTACTGTTGGGAAGAAACTGAAGATAGGAGTTCCTGTTAAATATGGAGATAACTACACTGAATTCTTGAAAATAACATATGATCGTGGTACCAATAAAACAGAAGCCACTGGATTCTGCATTGATGTCTTCAAAGCTGTCTTGGATATTTTGCCCTACGAATTACCATACGAATTTCTTGCATATGCAAAGCCTGATGGTGAGATGGCAGGAAGCTACAATGACTTAATTTCTCAAATTTATTATGGGAACTATGATGCAGTAGTGGGAGATGTAACAATCATTGCAAATAGATCCAACTATGTTGATTTCACAATGCCATACACAGAATCCGGTGTTACAATGGTTGTTTCAATGAAAGACAATAGGAAGAAAAATGCATGGGCTTTTTTGAAGCCACTGACATGGGATCTTTGGGTAGCATCAGCTTGTTCACTTATATTCATTGGATTCGTTGTATGGGTTCTTGAACATCGAATAAACGACGACTTTAGAGGACCACCCTCTCATCAGATTGGTACAAGTTTATGGTTTTCCTTCTCAACTGTGGTTTATGCTCATAGAGAGAAAGTGGTTAGCAACTTGGCTAGATTTGTGGTGGTTGTATGGCTTTTTGTGGTTCTAATTCTAGTTCAAAGTTACACTGCAAGCTTGACTTCATTGTTAACAGTTGAACAACTAAGTCCAACAATTACAGATGTTAACCAACTTCTAAAGAATAAAATGAATGTTGGCTATCTCAAAGGTTCTTTTGTTTATGGAATTTTGAAGAACTTGGGTTTTCCAGATTCTCAACTCATTACTTATCAATCACCTGAAGAATGTAATGAACTTTTCATAAAAGGAAGTGTAAATGGTGGAATTGATGCCGCTTTTGATGAAGTTCCCTATGTTAAGCACTTTCTTGGAATTTATAGTTGTTCAAAGTATGTCATGGTCGAACCAAAATTTAAAACGGGTGGTTTTGGCTATGCGTTTCCAAAAGGTTCACCTCTTGTAGCTGACATTTCTAGGGCAATCCTAAATGTGACTCAGGGAGGCAAAATAAAAACAATTGAGAATACATGGTTCAGAGAACCAAGTTGTCTAAATTCCAACACAGATATTTTCTTAAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTCATAGCAGGGATTTGTTCCCTGTCAGCACTCCTAATCTTTTTGGTGACATTCCTATATCAGCACAACCACATTTGGTTATACAATAATTCAAACACTTCAATATGGCGACGATTTCGCGTCTTAGTAAGGATATTTGATCAAAAAGACCTGAATTGTCACGCATTCAAGAAAAGTGAAAATAAAAAGGAAAGCAGTGACAGTCCTTGTTCATTTGAGGCATCTCCAGGAACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCGGTTTATGGCGATTTTAGTTTTAGTCCAAACATAGAAATGGATGTTGTGCAAATTACTAATCAAGAAGTTGCTCCTGTGAACAACTGTGAAATTAACTCACAAGCAACAGCCAACATGACCTCATCTACATTTGTAACATCCAGCCCATAA 2961 0.361 MILIVIITCWCLNMLGGGMAQIRNESNVVVKVGAVLDISNGTVGIIGLSCINMALSDFYHSHSHYKTRIQIILRDSHKDVLTAGAQALDLIKNEKVQAIMGPTTTMQANFVIQLGDKAHVPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIIQAFGWKQVVPIYIDNSFGEGLIPYLTNALQQANIQLPYLSAISLSATDDAITQELYKIMTIISTRVFVVHMSTNLGSKLFTLAKKIGMMSQGYVWIVTDSMANLFSSFDFTVKESMEGVLGVRTYIPKTNKLDGFGVRWKRKFISHNPTLVDTNLNIFGIWAYDATIALAMAIEKVGIGNTNFGYNESNTSSNYYMPNFEKFGIAQNGEKLSEALSKTRFKGLSGDFNVVDGKLQAPIFEIINMIGDEEKRVGFWTPNKGLARNLDRKGQISNNIIYSTSKNDLGSIIWPGDVYSISKGWEIPTVGKKLKIGVPVKYGDNYTEFLKITYDRGTNKTEATGFCIDVFKAVLDILPYELPYEFLAYAKPDGEMAGSYNDLISQIYYGNYDAVVGDVTIIANRSNYVDFTMPYTESGVTMVVSMKDNRKKNAWAFLKPLTWDLWVASACSLIFIGFVVWVLEHRINDDFRGPPSHQIGTSLWFSFSTVVYAHREKVVSNLARFVVVVWLFVVLILVQSYTASLTSLLTVEQLSPTITDVNQLLKNKMNVGYLKGSFVYGILKNLGFPDSQLITYQSPEECNELFIKGSVNGGIDAAFDEVPYVKHFLGIYSCSKYVMVEPKFKTGGFGYAFPKGSPLVADISRAILNVTQGGKIKTIENTWFREPSCLNSNTDIFLNNNLGLESFWGLFLIAGICSLSALLIFLVTFLYQHNHIWLYNNSNTSIWRRFRVLVRIFDQKDLNCHAFKKSENKKESSDSPCSFEASPGTHCPPSPSSQTESNVSVYGDFSFSPNIEMDVVQITNQEVAPVNNCEINSQATANMTSSTFVTSSP* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0732 986 CDD PBP1_GABAb_receptor_plant 31 423 IPR044440 -
Tpr7g0732 986 Gene3D - 734 824 - -
Tpr7g0732 986 PIRSF IGluLR_plant 1 944 IPR017103 -
Tpr7g0732 986 Gene3D - 587 717 - -
Tpr7g0732 986 SUPERFAMILY Periplasmic binding protein-like I 29 449 IPR028082 -
Tpr7g0732 986 Pfam Bacterial extracellular solute-binding proteins, family 3 493 818 IPR001638 -
Tpr7g0732 986 Gene3D - 148 312 - -
Tpr7g0732 986 SUPERFAMILY Periplasmic binding protein-like II 444 820 - -
Tpr7g0732 986 PANTHER GLUTAMATE RECEPTOR 2.9 30 917 - -
Tpr7g0732 986 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 917 - -
Tpr7g0732 986 Pfam Ligand-gated ion channel 819 849 IPR001320 GO:0015276|GO:0016020
Tpr7g0732 986 SMART GluR_14 468 819 IPR001320 GO:0015276|GO:0016020
Tpr7g0732 986 Gene3D - 362 467 - -
Tpr7g0732 986 Gene3D - 468 586 - -
Tpr7g0732 986 CDD GluR_Plant 465 817 - -
Tpr7g0732 986 Pfam Receptor family ligand binding region 50 404 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0732 Tpr-Chr7 6490936 6497108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0732 30 967 Ion Channels AT2G29120 48.520 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0732 K05387 - tcc:18587654 1112.44