Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0731 ATGGTGAAGATGGATAATCCCTCAATTATGATATTCATGATTATAACTTGTTTGGTTGTAAATATGTTGGGTGGTGGAATGGCACAAATTAGAAACGAGAGTAGTGTTGTAGTGAAAGTTGGAGCTGTACTTGATGTTAGCAATGGAACGGTTGGGATAATAGGATTGAGCTGCATCAACATGGCTCTCTCAGATTTCTATGAATCTCATTCTCATTACAAAACCAGAATTCAAATCATCGTTAGGGATTCTCATAAGGACGTCGTCACTTCAGCCGCACACGCTCTGGATCTCATAAAAAATGAGGAAGTGCAAGCAATCATAGGACCAATAACAACAATGGAAGCAAATTTCGTGATTCAAATAGGAGAAAAAGCACACATACCCATTGTAACCTTTTCAGCAACAAGCCCTTCACTAGCATCACTTCAAAGTCCATATTTTTTCCAAATATCACAAATTGATTCAGCTCAAGTAAAAGTCATCACCACAATTATCCAAGCTTTTGGTTGGAAACAAGTTATCCCCATTTACATAGACAATAGTTTTGGTGAAGGACTCATACCTTATTTAACCAACGTTCTTCAACAAGCCAATATCCAAGTTCCATATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTGATGAGCTTTATAAAATAATGACTACTATACCCACTAGAGTATTTATTGTGCACATGTCACCAAATCTTGGGTCTAAACTTTTTACCTTAGCAAAAAAAATTGGGATGATGGGTGAAGGCTATGTTTGGATAGTAACCGATAGTATGGCTAATTTGTTCAATTCATTGAATTTGAATGTGTGGGAATCAATGGAAGGAGTAATTGGTGTGAGGACTTATATTCCTAGAACAAAAAAGCTAGATGATTTTGGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTTGTTGACATAAATTTGAACATTTTTGGTATATGGGCTTATGATGCTACAATTGCATTGGCAATGGCTATTGAGAAAGTTGGAATTGGAAACACCAAATTTGGTTACAATGAGAGCAACACATTAAGCAATTACTACATACCTAGTTTTGAAAAGTTTGGTATTGCTCAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAACGCTCGCTTTAAAGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGCTACAAGCATCAATATTTGAGATAATCAATGTGATTGGTAATGGAGAAAAGAGGGTTGGATTTTGGACACCAAATAAAGGGCTGGCTAGAAATTTGGATACCAAGGGTCTAATAAGCAATAATAGCATATATTCTAGTTCTAAAAATGATCTTGGATCAATCATATGGCCAGGGGATATATATTCTATTCCAAAGGGATGGGAAATTCCAACTATTGGGAAGAAGTTGAGGATAGGTGTTCCAGTTAAAAAAGGAGATAATTATGCTGAATTTGTGAAAGTAACATATGATCATAATACCAATAAAACAGATGCCACTGGATTCTGCATTGATGTCTTCAAAGCTGTAGTCGATGTTTTGCCTTACGCCTTACCATATGAATTTTTTCGATTTGCAAAGCCTGATGGTGAAATGGCTGGAAACTACAATGACTTGATCGCTCAAATTTATTACGGGAACTATGATGCAGTAGTGGGGGATGTAACAATCACTGCAAACAGATCCAACTATGTTGATTTCACAATGCCATTCACAGAAACTGGTGTATCAATGGTTGTTTCAACGAAAGACAACAGGAAGAAAAATGCATGGGCATTTTTGAAACCATTGACATGGGGTCTTTGGGTAACATCAGGTTGTTCATTTGTATTCATTGGATTTGTTGTATGGGTTCTTGAACATAGAATAAACAACAATTTCAGGGGACCACCCTCTCATCAGATTGGCACAAGTTTATGGTTTTCATTTTCAACTATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGGGTAGATTTGTGGTGGTCGTATGGATTTTTGTGGTTCTAATTTTGGTTCAAAGTTACACTGCAAGCTTGACTTCACACTTAACAGTTGAACAACTAAGTCCAACTATTACAGATGTTAACCAACTTCTAAAGAATAAAATGAATGTTGGCTATCTTAAAGGTTCTTTTGTTTATGGAATTTTAAAGAACTTGAGTTTTTCAGACTCTCAGCTCATTACTTATCAATCACCAGGAGAATGTCATGAGCTTTTCCTAAAAGGAAGTGTAAATGGTGGCATTGATGCAGCTTTTCTTGAGGCTGCATATTTTAAGCACTTTCTTGGGACTTATAGTTGTTCAAAGTATGTCATGGTTGGACCAAGATATAAAACTGGTGGTCTTGGTTTTGCCTTTCCAAAAGGTTCACCTCTTGTAGCCGACATTTCTCGGGCAATTCTAAACGTCACTCAAGGAGACAAAATGAGAACAATTGAGAATGCATGGTTCAAAGAACCTAGTTGTCTAGTTTCTAGTTCAGAAATTTCCTCAAATAACAATCTTGGACTTGAAAGTTTTTGGGGACTGTTTCTCATTGCAGGGATTGCTTCCTTATTGGCACTACTAATCTTTATGGTAACTTTTATATATCAGCACAAACATATTTTGTTAAACAATGATCCAATTACTTCAATATGGCGACGAGTTTGCATCTTTGTAAGGATATTTGATCAAAGAGACTTGAATTGTCACACATTTGAAAAAAGTGAAAATAAGAATGAAAATAGTAACAATTCTCATGACGACGATTTAGGTGCAGTTGAGATCTCTCTAGGCACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATTAAACGTTTCAGTTCATGGCGATTTTAGTCCCAACACGGTAATAGATGTTGGATGCAACGGTGAAATTAACATCCAAGAAACATGA 2925 0.3638 MVKMDNPSIMIFMIITCLVVNMLGGGMAQIRNESSVVVKVGAVLDVSNGTVGIIGLSCINMALSDFYESHSHYKTRIQIIVRDSHKDVVTSAAHALDLIKNEEVQAIIGPITTMEANFVIQIGEKAHIPIVTFSATSPSLASLQSPYFFQISQIDSAQVKVITTIIQAFGWKQVIPIYIDNSFGEGLIPYLTNVLQQANIQVPYLSAISLSATDDAITDELYKIMTTIPTRVFIVHMSPNLGSKLFTLAKKIGMMGEGYVWIVTDSMANLFNSLNLNVWESMEGVIGVRTYIPRTKKLDDFGVRWKRKFISDNPTLVDINLNIFGIWAYDATIALAMAIEKVGIGNTKFGYNESNTLSNYYIPSFEKFGIAQNGEKLSEALSNARFKGLSGDFNVVDGKLQASIFEIINVIGNGEKRVGFWTPNKGLARNLDTKGLISNNSIYSSSKNDLGSIIWPGDIYSIPKGWEIPTIGKKLRIGVPVKKGDNYAEFVKVTYDHNTNKTDATGFCIDVFKAVVDVLPYALPYEFFRFAKPDGEMAGNYNDLIAQIYYGNYDAVVGDVTITANRSNYVDFTMPFTETGVSMVVSTKDNRKKNAWAFLKPLTWGLWVTSGCSFVFIGFVVWVLEHRINNNFRGPPSHQIGTSLWFSFSTMVYAHREKVVSNLGRFVVVVWIFVVLILVQSYTASLTSHLTVEQLSPTITDVNQLLKNKMNVGYLKGSFVYGILKNLSFSDSQLITYQSPGECHELFLKGSVNGGIDAAFLEAAYFKHFLGTYSCSKYVMVGPRYKTGGLGFAFPKGSPLVADISRAILNVTQGDKMRTIENAWFKEPSCLVSSSEISSNNNLGLESFWGLFLIAGIASLLALLIFMVTFIYQHKHILLNNDPITSIWRRVCIFVRIFDQRDLNCHTFEKSENKNENSNNSHDDDLGAVEISLGTHCPPSPSSQTELNVSVHGDFSPNTVIDVGCNGEINIQET* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0731 974 SUPERFAMILY Periplasmic binding protein-like II 452 828 - -
Tpr7g0731 974 CDD PBP1_GABAb_receptor_plant 39 431 IPR044440 -
Tpr7g0731 974 Gene3D - 732 832 - -
Tpr7g0731 974 Pfam Bacterial extracellular solute-binding proteins, family 3 501 826 IPR001638 -
Tpr7g0731 974 SUPERFAMILY Periplasmic binding protein-like I 37 467 IPR028082 -
Tpr7g0731 974 Gene3D - 595 731 - -
Tpr7g0731 974 PANTHER GLUTAMATE RECEPTOR 2.9 38 924 - -
Tpr7g0731 974 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 924 - -
Tpr7g0731 974 Gene3D - 475 594 - -
Tpr7g0731 974 PIRSF IGluLR_plant 5 945 IPR017103 -
Tpr7g0731 974 SMART GluR_14 476 827 IPR001320 GO:0015276|GO:0016020
Tpr7g0731 974 Pfam Ligand-gated ion channel 827 858 IPR001320 GO:0015276|GO:0016020
Tpr7g0731 974 CDD GluR_Plant 473 825 - -
Tpr7g0731 974 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Tpr7g0731 974 Gene3D - 370 474 - -
Tpr7g0731 974 Gene3D - 156 320 - -
Tpr7g0731 974 SUPERFAMILY Voltage-gated potassium channels 603 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0731 Tpr-Chr7 6478151 6486139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0731 3 949 Ion Channels AT2G29120 47.699 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0731 K05387 - tcc:18587654 1080.09