Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0730 ATGAAGAAGAAGGGTAATCCAATTAGCTTTGTTTACTTTGTGATATGCATGGTTACTTGTTGGTGTCTAAATGATGGAATATTGGCACAAAGAAATGAGACAGTGGTAGTGAAAGTTGGAGCTGTACTTGATATTAGCAACGGTCCTAATGCTGCTGGGATAATAGGATTGAGCTGCATCAACATGGCTCTCTCAGATTTCTATCACTCTCATTCTCATTACAAAACTAGAATCCAAATCATCCTTAGAGATTCTCACAAGGACGTGGTCACTGCTGCTGCACACGCTTTGGATCTCATAAAAAATGAGGAAGTGCAAGCCATAATGGGACCATCAACAACAATGGAAGCAATTTTTGTGATTCAACTAGGAGACAAAGCACAAATACCCATTGTAACCTTTTCAGCAACAAGTCCTTCACTAGCATCACTTCAAAGTCCATATTTTTTTCAAATATCACAAATTGATTCAGCTCAAGTTAAAGCAATCACATCAATTGTACTAGCTTTTGGTTGGAAACAAGTTGTCCCAATTTACATAGACAATAGTTTTGGTGAAGGACTCATACCTTATTTAACCAATGTTCTTCAACAAGCCAATATCAAAGTACCTTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTCAAGAGCTTTATAAAATAATGACTATTATATCCACTAGAGTATTTGTTGTGCACATGTCAACAAATCTCGGGTCTAAACTTTTTACCTTAGCAAAAAAAATAGGGATGATGAGTCAAGGTTATGTTTGGATAGTAACTGATAGTATGGCTAATTTATTCAATTCATTTGATTTTAATGTGAAGGAATCAATGGAAGGTGTATTGGGTGTTAGGACTTATATTCCAAAAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATTAGTGACAATCCAACACTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAAGTTGGAATTGGAAACACCAAATTTGGTTACAATGAGAGCAACACATCAAGCAATTACAACATACCTGATTTTGAAAAGTTTGGTATTGCACAAAATGGTGACAAATTGAGTGAAGCCTTGTCAAACACTAGCTTTAATGGTCTTAGTGGTGATTTCAATGTTATTGGTGGAAAGTTACAAGCATCAACATTTGAGATAATTAATATGATTGGTGATGGGGAGAAGAGGGTTGGATTTTGGACACCAGATAAAGGGTTGACTAGAAATTTGGACTCAAAAGGCAACATGAGCAATAATAGCAGATATTCTAGTTCTAAAGATGATCTTGGATCAATCATATGGCCAGGGGATGTGTACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAGTTGAAGATAGGTGTTCCAATTAAAAGTGGAGATAATAACTACACTGAGTTCTTGAAAGTAACATATGATCATAGTACCGATACAACAAAAGCCACTGGTTTCTGCATTGATGTCTTCACAGCTGTGGTGGATATTTTGCCTTATGACTTGCCATATGAATTTGTTCGATATGCAAAGCCTGATGGTGATGAGATGGCAGGAACATATGATGAGTTGATCAATCAACTTTATTATGGGAACTTTGACGCGGTAGTGGGGGATATTACAATCACTGCAGATAGATCCAACAAAGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTTTCAATGAAAGACAGCAGGAAGAAAAATGCATGGGCTTTTTTGAAGCCACTGACATGGGATCTTTGGGTAGTATCAGCTTGTTCATTTGTATTCATTGGATTTGTTGTATGGGTTCTTGAACATCGAGTAAACAACGACTTCAGAGGACCACCCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTCTCAACTATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGGCTAGATTTGTTGTGGTTGTATGGGTTTTTGTGGTTTTAATTCTGGTTCAAAGTTACACTGCAAGCTTGACTTCACTTTTAACAGTTGAACAACTAAGGCCAGCTATTACAGATGTTGACCAACTTCTAAAGAATAAGATGAATGTTGGCTATCTCAAAGGTTCTTTTGTTTATGGAATTTTGAAGAACTTGGGTTTTCCAGATTCTCAGATTATTACTTATCAATCACCTGAAGAATGTAATGAGCTTTTCATAAAAGGAAGTGTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCACTTTCTTGGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATTTAAAGCTGGTGGTTTTGGATATGCTTTTCCAAAAGGCTCACCTCTTGTGGCTGATATTTCAAGGGCAATCCTAAATGTGACTCAAGGAGACAAAATGAGAACAATTGAGAAGGCATGGTTCAAGGAAGCTATTTGTCTAGATTCTAATAAAGAAATTTCCTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTATTTCTCATTGCAGGGATTGCTTCCCTATTAGCACTCCTAATCTTTGTGGTAACATTTCTATATCAGCACAAACATATATGGTTAAACAATGATCCAAATACTTCAATATGGCAACGAGTTTGCATCTTGGTAAGAATATTTGATCAAAGAGACTCGAACTGTCACACATTCAAGAAAAGTGAAAATAAAATTAAAAGCGGTAATAGTCGTCATCATCATGATGAAGATGATTTAGGCCCATCTCTAGGTACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCGGTTTATGGCGACTTTAGTCCAAACAGAGAAATGGATGTTGTACAAATTACTAACCAAGAAGTTTCTTCTGTGCATTGCAATGAAATTAACTTACAAGCAACATGA 2964 0.3644 MKKKGNPISFVYFVICMVTCWCLNDGILAQRNETVVVKVGAVLDISNGPNAAGIIGLSCINMALSDFYHSHSHYKTRIQIILRDSHKDVVTAAAHALDLIKNEEVQAIMGPSTTMEAIFVIQLGDKAQIPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIVLAFGWKQVVPIYIDNSFGEGLIPYLTNVLQQANIKVPYLSAISLSATDDAITQELYKIMTIISTRVFVVHMSTNLGSKLFTLAKKIGMMSQGYVWIVTDSMANLFNSFDFNVKESMEGVLGVRTYIPKTKKLDDFRVRWKRKFISDNPTLVDTNLNIFGIWAYDATIALAMAIEKVGIGNTKFGYNESNTSSNYNIPDFEKFGIAQNGDKLSEALSNTSFNGLSGDFNVIGGKLQASTFEIINMIGDGEKRVGFWTPDKGLTRNLDSKGNMSNNSRYSSSKDDLGSIIWPGDVYSIPKGWEIPTIGKKLKIGVPIKSGDNNYTEFLKVTYDHSTDTTKATGFCIDVFTAVVDILPYDLPYEFVRYAKPDGDEMAGTYDELINQLYYGNFDAVVGDITITADRSNKVDFTMPYTESGVTMVVSMKDSRKKNAWAFLKPLTWDLWVVSACSFVFIGFVVWVLEHRVNNDFRGPPSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVVWVFVVLILVQSYTASLTSLLTVEQLRPAITDVDQLLKNKMNVGYLKGSFVYGILKNLGFPDSQIITYQSPEECNELFIKGSVNGGIDAAFDEVPYVKHFLGTYSCSKYVMVEPRFKAGGFGYAFPKGSPLVADISRAILNVTQGDKMRTIEKAWFKEAICLDSNKEISSNNNLGLESFWGLFLIAGIASLLALLIFVVTFLYQHKHIWLNNDPNTSIWQRVCILVRIFDQRDSNCHTFKKSENKIKSGNSRHHHDEDDLGPSLGTHCPPSPSSQTESNVSVYGDFSPNREMDVVQITNQEVSSVHCNEINLQAT* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0730 987 SMART GluR_14 477 830 IPR001320 GO:0015276|GO:0016020
Tpr7g0730 987 CDD PBP1_GABAb_receptor_plant 38 432 IPR044440 -
Tpr7g0730 987 CDD GluR_Plant 474 828 - -
Tpr7g0730 987 Pfam Bacterial extracellular solute-binding proteins, family 3 503 829 IPR001638 -
Tpr7g0730 987 Gene3D - 598 726 - -
Tpr7g0730 987 Gene3D - 371 475 - -
Tpr7g0730 987 Gene3D - 476 597 - -
Tpr7g0730 987 SUPERFAMILY Periplasmic binding protein-like I 36 468 IPR028082 -
Tpr7g0730 987 PIRSF IGluLR_plant 6 965 IPR017103 -
Tpr7g0730 987 Pfam Receptor family ligand binding region 59 413 IPR001828 -
Tpr7g0730 987 PANTHER GLUTAMATE RECEPTOR 2.9 37 926 - -
Tpr7g0730 987 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 926 - -
Tpr7g0730 987 Gene3D - 727 831 - -
Tpr7g0730 987 SUPERFAMILY Periplasmic binding protein-like II 453 830 - -
Tpr7g0730 987 Pfam Ligand-gated ion channel 830 861 IPR001320 GO:0015276|GO:0016020
Tpr7g0730 987 Gene3D - 157 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0730 Tpr-Chr7 6460278 6474220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0730 9 979 Ion Channels AT2G29120 48.315 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0730 K05387 - tcc:18587654 1086.63