Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0729 ATGATGAAGAAAGATAATCCAATAAGCTTTGTTTACTTTGTGATATTCATGGTTACTTGTTGGTGTGTTCTGTTGGGTGGAATGGCACAAACTAGAAACGAGAGTAATGTTATAGTGAAAGTTGGAGCTGTACTTGATGTTAGCAATGGAACCGTTGGTATAATAGGATTGAGCTGCATCAACATGGCCCTTACAGATTTCTATGAATCTCATTCTCATTACAAAACTAGAATCCAAATCATCGTTAAGGATTCTCATAAGGACGTCGTCACTGCAGCCACGCATGCGTTGGACCTTATAAAGAATGAGGAAGTGCAAGCAATCATGGGACCAATAACAACAATGGAAGCAAATTATATGATTCAACTAGGAGACAAAGCACAAATACCCATTGTAACCTTTTCAGCAACAAGCCCTTCACTAGCATCACTTGAAAGTCAATACTTTTTTCAAATATCACAAAATGATTCAGCTCAAGTAAAAGCCATCACCTCAATTATTCAAGCTTTTGGTTGGAAACAAGTTGTCCCCATTTACATTGACAATAGTTTTGGTGAAGGACTCATACATTATTTAGCCAATGTTCTTCAAGAAGCCAATATCCAAGTTCCCTATGTAAGTGCAATTTCTCTTTCAGCCAACGATCATGTTATCACTAGAGAGCTTCAAAAAATAATGACTACTATACCCACTAGAGTATATATTGTGCACATGTCACCAGATCTTGGCTCTAAGCTTTTTACCTTGGCAAAAAAAATTGGGATGATGGGTCAAGGCTATGTTTGGATAGTAACCGATAGTATAGCTAATTTATTCAATTCATTGAATTTTAATGTGCGGGAATCAATGGAAGGAGTAATTGGTGTGAGGACTTATATCCCTAGAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTCTTTAACACAAAATTTAACATTTTTGGAATTTGGGCTTATGATGCTACAACTGCATTGGCGATGGCTATGGAGAAGGTTGGAATTGAAAACACAAAATTTGGTTACAACGAGAGTAACACATCAAGCAATTACTACATGCCTAATTTTGAAAAGTTTGGTATTGCACAAAATGGTAAGAAGTTGAGTGAAGCTTTGTCAAACACTAGATTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGTTACAATCATCAATATTTGAGATAATTAATGTTATTGGTAATGGAGAAAAGAGGGTTGGATTTTGGACACCAAGTAAAGGGTTAGCTAGAAATTTGGACATGAAGGGCCTAATAAGCAAAAATAGCATATATTCTAGTTCTAAAAATGATCTCAGATCAATCATATGGCCAGGGGATATGTACTCTATTCCTCCTATTTGGAAGAAGTTAAAGATAGGAGTTCCAGCTAGACATGCAGATAACTACCCTGAATTTTTGAAAGTAAAATATGATAATAATACCAATAAAACACAAGCCACTGGCTTCTGCATTGATGTTTTCAAAGCAGCAGTGGATATTTTGCCTTATAACTTGGAATATGAATTTTTAGAATATGCAAAGCCTGATGGTGAGATGGCAGGAACATACGATGAGTTGATCACTCAACTTTATCAAGGGAAGTATGACGCAGTAGTGGGGGATGTAACAATCATTGCAAACAGATCCAACTATGTTGATTTCACAATGCCTTACATAGAATCTGGTGTTACAATGGTTGTTTCAACGAAAGACAATAGGAAGAAAAATGCATGGGCTTTTTTGAAGCCACTGACATGGGATCTTTGGGTAGCATCAGTTGGTTCTTTTGTATTGTTTGGATTTGTTGTATGGAACCTTGAACACAAAATAAACGATGACTTCCGAGGACCACCTTCTTATCAGATTGGCACAAGTTTATGGTTTTCCTTCTCAACTATGGTTTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGACTCGATTTGTAACGGTTGTTTGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGTTACACTGCAAGCTTGACTTCGATGTTAACAGTTGAACAACTAAGTCCATCAATTACAGATGTTAACGAACTTATAAGGAATAAGATGAATGTTGGCTATCCCATTGGTTCTTATGTTCAAGGAATTGTGAAGAAATTAGGTTTCCCAGACTCTCAGCTCATTGCTTATCAATCACCTAATGAATTTCACGAGCTTTTCATAAAAGGAAGTGTAAATGGAGGTATTGATGCTGCTTTTGATGAAGTTGCTTATGTTAAGCACTTTCTTAGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATATAAAACCGGTGGTTTTGGCTATGTGTTTCCAAAAGGATCACCTCTTGTAGCTGACATTTCAAGGGCAATCCTAAATGTGACAGAGGGAGGCAAAATGAAAACAATTGAAAATATATGGTTCAATGAACCTACTTGTCCAGATTCTAATACAAAAGTTTCCTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTCATAGCTGGAATTGCTTCCATAATAGCACTACTATTCTTTTGGGTGCCCTTCCTATATGAGCACAAACACATTTGGCTACAAAATAATTTAAGTACTTCATTATGGCGACGGATTTGCATTTTGGTAAAGATATTTGATCAAAGAAACTTGCACCATTACACATTCAAGAAAAGTAAAAATGAAAGCGAAAATAGTAACATTGCTCATCATGATGATGGTTTAGGTGCAGTTGAGGCCTCTTCGGATACACAGTGTCCTCCTAGTCCATTTAGTCAAACTGAATCAAATATTTCGGGTTATGAGGAATTTAGTCCAAACACAGAAATGAATATTGTGCCAATTATTAATGAAGAAGTTGCTCATGTGAACAACAATGAAATTAATTAG 2931 0.3603 MMKKDNPISFVYFVIFMVTCWCVLLGGMAQTRNESNVIVKVGAVLDVSNGTVGIIGLSCINMALTDFYESHSHYKTRIQIIVKDSHKDVVTAATHALDLIKNEEVQAIMGPITTMEANYMIQLGDKAQIPIVTFSATSPSLASLESQYFFQISQNDSAQVKAITSIIQAFGWKQVVPIYIDNSFGEGLIHYLANVLQEANIQVPYVSAISLSANDHVITRELQKIMTTIPTRVYIVHMSPDLGSKLFTLAKKIGMMGQGYVWIVTDSIANLFNSLNFNVRESMEGVIGVRTYIPRTKKLDDFRVRWKRKFISDNPTLFNTKFNIFGIWAYDATTALAMAMEKVGIENTKFGYNESNTSSNYYMPNFEKFGIAQNGKKLSEALSNTRFNGLSGDFNVVDGKLQSSIFEIINVIGNGEKRVGFWTPSKGLARNLDMKGLISKNSIYSSSKNDLRSIIWPGDMYSIPPIWKKLKIGVPARHADNYPEFLKVKYDNNTNKTQATGFCIDVFKAAVDILPYNLEYEFLEYAKPDGEMAGTYDELITQLYQGKYDAVVGDVTIIANRSNYVDFTMPYIESGVTMVVSTKDNRKKNAWAFLKPLTWDLWVASVGSFVLFGFVVWNLEHKINDDFRGPPSYQIGTSLWFSFSTMVYAHREKVVSNLTRFVTVVWVFVVLILVQSYTASLTSMLTVEQLSPSITDVNELIRNKMNVGYPIGSYVQGIVKKLGFPDSQLIAYQSPNEFHELFIKGSVNGGIDAAFDEVAYVKHFLRTYSCSKYVMVEPRYKTGGFGYVFPKGSPLVADISRAILNVTEGGKMKTIENIWFNEPTCPDSNTKVSSNNNLGLESFWGLFLIAGIASIIALLFFWVPFLYEHKHIWLQNNLSTSLWRRICILVKIFDQRNLHHYTFKKSKNESENSNIAHHDDGLGAVEASSDTQCPPSPFSQTESNISGYEEFSPNTEMNIVPIINEEVAHVNNNEIN* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0729 976 Gene3D - 471 589 - -
Tpr7g0729 976 Gene3D - 590 714 - -
Tpr7g0729 976 Gene3D - 752 785 - -
Tpr7g0729 976 Pfam Receptor family ligand binding region 59 413 IPR001828 -
Tpr7g0729 976 Gene3D - 371 470 - -
Tpr7g0729 976 Pfam Ligand-gated ion channel 822 853 IPR001320 GO:0015276|GO:0016020
Tpr7g0729 976 Gene3D - 786 820 - -
Tpr7g0729 976 SMART GluR_14 471 822 IPR001320 GO:0015276|GO:0016020
Tpr7g0729 976 CDD GluR_Plant 468 820 - -
Tpr7g0729 976 PIRSF IGluLR_plant 7 960 IPR017103 -
Tpr7g0729 976 CDD PBP1_GABAb_receptor_plant 40 432 IPR044440 -
Tpr7g0729 976 SUPERFAMILY Periplasmic binding protein-like I 39 458 IPR028082 -
Tpr7g0729 976 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 914 - -
Tpr7g0729 976 SUPERFAMILY Periplasmic binding protein-like II 467 823 - -
Tpr7g0729 976 PANTHER GLUTAMATE RECEPTOR 2.9 39 914 - -
Tpr7g0729 976 Pfam Bacterial extracellular solute-binding proteins, family 3 495 821 IPR001638 -
Tpr7g0729 976 Gene3D - 157 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0729 Tpr-Chr7 6445666 6450913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0729 2 956 Ion Channels AT2G29120 46.209 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0729 K05387 - tcc:18587654 1018.84