Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0722 ATGGGATATCTCAATTCTGCTTTGTCATCTTCAAGTCAGGCTAAAGATGATACACCGGCTAGCGGCGGCGGTCTTAGTCACAATGGAAAGTTTAGCTATGGGTATGCTAGCTCGGCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAACCGTTGGCCTTTTCGGAGTCTTCGATGGTCATGGAGGTATTCGTGCTGCTGAGTATGTTAAGAAAAACTTGTTCAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGACAATGAATATCTGAAATCAGAAAACAATCATCACAAAGATGCCGGATCTACTGCATCTACTGCCATTCTTGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGGGCTGTTATATGCAGGGGTGGTAAAGCAATTGCCGTTTCTCGAGATCATAAGCCAGACCAAACAGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTCGCGGATCCAGAAATCCAGGAGGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCCAGTGATGGGCTATGGGATGTCGTCACAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGGAGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACTTGTGTTGTTGTCCGTTTCTTGGTGAACCAAGACACTTCTTCTCAAGTAGCTCCGCATAACCAAGGCGCTTCTTCTCAAGTAGCTCCACATAACCAAGGTGCTTCTTCTCAGGTAGCTCCGCGTAACCAAGGCGCTTCTTCTCAAGTAGCTCCGCATAACCAAGGCGCTTCTTCTCAAGTAGCTCCGCGTAACCAAGGTACTTCTTCTCAAGTAGCTCCTCGTAACCAAGGCACTTCTTCTCAAGTAGCTCAGCGTAACCAAGGCACTTCTTCTCAAGTAGCTCCGCGTAATTAA 1110 0.4486 MGYLNSALSSSSQAKDDTPASGGGLSHNGKFSYGYASSAGKRSSMEDFYETRIDGVDGETVGLFGVFDGHGGIRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDNEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGKAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPIGDAEEAAKRLMQEAYQRGSADNITCVVVRFLVNQDTSSQVAPHNQGASSQVAPHNQGASSQVAPRNQGASSQVAPHNQGASSQVAPRNQGTSSQVAPRNQGTSSQVAQRNQGTSSQVAPRN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0722 369 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Tpr7g0722 369 SUPERFAMILY PP2C-like 26 278 IPR036457 -
Tpr7g0722 369 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g0722 369 CDD PP2Cc 31 278 IPR001932 -
Tpr7g0722 369 Gene3D - 24 285 IPR036457 -
Tpr7g0722 369 Pfam Protein phosphatase 2C 58 271 IPR001932 -
Tpr7g0722 369 ProSiteProfiles PPM-type phosphatase domain profile. 32 278 IPR001932 -
Tpr7g0722 369 MobiDBLite consensus disorder prediction 1 19 - -
Tpr7g0722 369 PANTHER ALPHABET, ISOFORM E-RELATED 3 303 - -
Tpr7g0722 369 SMART PP2C_SIG_2 27 278 IPR001932 -
Tpr7g0722 369 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 303 - -
Tpr7g0722 369 SMART PP2C_4 22 276 IPR001932 -
Tpr7g0722 369 MobiDBLite consensus disorder prediction 287 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0722 Tpr-Chr7 6394482 6398735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0722 1 282 PP2C-type Phosphatase Gene Family AT4G31750 87.633 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0722 K17506 - gmx:100797070 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0722 7 6394482 6398735 Tpr7g0722 7 6394482 6398735 ECH