Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0693 ATGGCTAAGTGTCAACGGAGCAACGCTGATTCAATAGTTCTCGATCACCGCCACAATGCCAAAAACACCACCGCTGGTAACTTCCGCCTATCTGCTTTATTCCGCCGCATCATTTTCGACGCCCTAAGCTGCGGCGGAACTTCACGGCACCGACATCACCACCGCAACGAGTCCGTTTGCTCCGCCTCCACCGTATCTTCGGCAAGCTTTGCCGCCGGTAGTCATAAAGAAAAGCAACAAGTAAGAGAAGAGAAACAAGAGAAGCTATCGGATATTCTGAACATACAGGTGCATGAAATTGAAGCGGAATCTAAGAAGGAAGAGATATTGACGGAGCTGAAACAAGTGGTGAAGGAATTGCGTGAAGAGGATTCGACGAAACGGCGAATCGCGGCGGCTAGAGTAAGATCACTGGCGAAAGATGATTCAGAAGCGAGAGGCACACTCGCAATGCTTGGAGCAATTTCTCCACTCGTTGGAATGCTCGATTCACAAGATCTTCATTCTCAGATCGATTCTCTCTATGCATTGCTCAATCTCGGAATCGGCAACGATGCAAATAAAGCAGCGATTGTGAAAATTGGTGCTGTTCACAAGATGCTAAAGATCGTTGAATCGTCGTGTGTTGTTGATTCGTCGGTTTCTGAGGCAATCGTTGCGAATTTCCTTGGATTAAGTGCTTTGGATTTGAACAAACCAATAATTGGATCTTCTGGTGCAATACCCTTTCTAGTTAGGACCCTTCAAAATTTAGATAATAGTAGTAAAGGTAGTTCCCAAGTTAAGCAAGATGCTTTTCGGGCTCTTTACAATCTTTCGATCAATCAGGCGAACATTTCATTTGTTTTGGAAACTGATTTGGTATTGTTTCTGATAAATTCGATAGAAGATATGGAAGTGAGTGAGAGAGTTCTTTCGATTCTGAGCAATTTGGTGTCGAGTCCGGAAGGTAGAAAAGCTATAAGTGCTGTTAGGGATGCGATCACAATTTTGGTTGATGTGTTGAATTGGACAGATTCACCTAAATGTCAAGAGAAGGCTTCATACATTTTGATGATTATGGCACACAAAGCTTATGCTGATAGGCAGGCCATGATCGAGGCAGGGATTGTATCGTCATTGCTTGAGTTGACGCTTGTGGGTACTGCTTTGGCACAGAAAAGGGCGTCAAGGATATTGGAATGTTTTAGGGTATACAAAGGGAAGCAGGTTTCTGGTAGCTGTGATGGTGGGAACTTGGGTTTAACTGTCTCTGCGCCAATTTGTTCCTCGTCGTCTTCTTTTGTGAAGTCAGATGGAGGTGGTAAAGAGTATATAGTGGACGAAGCGAACATCATGAGTGATGAAAAGAAAGCAGTGAAGCAACTAGTTCAGCAGAGTTTGCAGAACAACATGATGAAAATTGTCAAGAGGGCTAACTTGAAGCAAGATTTCGTTCCTTCAGAGCGTTTCTCTTCGCTCACTTCAAGTTCAACATCAAAGAGCCTGCCATTTTGA 1497 0.4395 MAKCQRSNADSIVLDHRHNAKNTTAGNFRLSALFRRIIFDALSCGGTSRHRHHHRNESVCSASTVSSASFAAGSHKEKQQVREEKQEKLSDILNIQVHEIEAESKKEEILTELKQVVKELREEDSTKRRIAAARVRSLAKDDSEARGTLAMLGAISPLVGMLDSQDLHSQIDSLYALLNLGIGNDANKAAIVKIGAVHKMLKIVESSCVVDSSVSEAIVANFLGLSALDLNKPIIGSSGAIPFLVRTLQNLDNSSKGSSQVKQDAFRALYNLSINQANISFVLETDLVLFLINSIEDMEVSERVLSILSNLVSSPEGRKAISAVRDAITILVDVLNWTDSPKCQEKASYILMIMAHKAYADRQAMIEAGIVSSLLELTLVGTALAQKRASRILECFRVYKGKQVSGSCDGGNLGLTVSAPICSSSSSFVKSDGGGKEYIVDEANIMSDEKKAVKQLVQQSLQNNMMKIVKRANLKQDFVPSERFSSLTSSSTSKSLPF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0693 498 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 239 278 IPR000225 GO:0005515
Tpr7g0693 498 SUPERFAMILY ARM repeat 112 394 IPR016024 -
Tpr7g0693 498 Gene3D - 257 406 IPR011989 -
Tpr7g0693 498 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 498 - -
Tpr7g0693 498 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 498 - -
Tpr7g0693 498 SMART arm_5 184 227 IPR000225 GO:0005515
Tpr7g0693 498 SMART arm_5 228 274 IPR000225 GO:0005515
Tpr7g0693 498 SMART arm_5 275 313 IPR000225 GO:0005515
Tpr7g0693 498 SMART arm_5 142 182 IPR000225 GO:0005515
Tpr7g0693 498 SMART arm_5 317 356 IPR000225 GO:0005515
Tpr7g0693 498 Gene3D - 83 256 IPR011989 -
Tpr7g0693 498 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0693 Tpr-Chr7 6137532 6139666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0693 108 397 U-box Gene Family AT2G23140 33.677 6.92e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0693 - - gmx:100818576 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3435 1 38666452 38669507 Tpr7g0693 7 6137532 6139666 PCT