Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0685 ATGGATGATTCCGGTGATCGGTTTCCCATCGGAATGCGTGTACTTGCCGTTGACGATGATCCTACTTGTCTCTTGGTTTTGGAAACTTTGCTCCGAAGATGTCAATACCATGTAACCACGACTAGTCAAGCAAGAACAGCATTGACTATGTTAAGAGAAAACAAAGACAAGTTTGACTTGGTTATCAGTGACGTGCACATGCCTGATATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAGATGGACCTTCCTGTCATAATGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAGGGAATTTCCCACGGTGCCTGTGATTATCTGCTGAAACCCGTGAGGTTAGAGGAGCTAAAGAACATATGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGCAAACTAGACAAAACTACTTCTGAAAGTGGCAGTGGACTAAGATCAGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGGAAGGATCAAGATGAAGATGAAGATGAGGATAAAGAGAATGGTAATGACAATGAGGACCCATCTGCCCAGAAGAAACCCCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGCTGGGCATTGAAAAGGCTGTACCCAAAAAAATTCTTGATATGATGAATGTCGAAAACATTACAAGGGAGAATGTGGCGAGTCATCTCCAGAAGTATAGACTTTACCTGAAAAGAATTAGCTGTGTGGCAAACCAGCAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGCTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAATGGGATAATTAGTAATCTGAACACTCCAACTGGTCTGAATGGGCATGGATTTTCTCCTTCCGGACTACTTCAGTTGGGCCAATCACAAAGTTTTAACAATTCTTCCAATGATCAACTTAAATTCCAGCCGACTATAACCCCAGTTAATCAGAATATTCTTCAAGGAATGCCAATGTCCATAGGGTTTGATCACTTACAAAACAATAGCAGCAAAGGTGTTTTTCCTGTTCAAAACCTGAATACTGATGTGAAACCAACTTTTCCCATCCCAAATAGATTCCCGGATCAAATACCAAAAGTAACCACCTCTAGTTCTCATCCACCAAGTCTTGGTATCTCGAACAATGGCTTGATGTTGGAAACACACACTGAAGGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCGTCTTCTTCCGTATCCTCTCGACATTCGGACTTTTCTTTCTCTATGCTGGATCAAGGTAGGCATAGTGATAATTGGTCAAGCGTCGTGCCGTTATCTGGAATCCAGACAAATTCTTTCCCTTCAAGTGATTGTTTTAGACAGACAGCTATTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCCGGTGGGTCATTGGCAGATGTGCACTCCCAAGGAAGTGTTTTTACTAATTCGCCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAGGACCGTAATCAGGATGCTACTTACCACTCAAATATTACTTATGGATCAATTAACTCTCTTGCTCCAGTTAACGGTGCTGTTGTTCCACGAGGCCAAACAACCAGTAACTCCACCTTGCACAGAAACTTGGACACTAAATTTTGTGATCCAAGACAAATGAAGCATGCTGGATTCGCTGATTTAACTGAATGCAGCTCATCAAGACAACCTCGAGTGAATATCGTAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGAACAGGAGCAAGATAAGATGAAATTGTTGGGTGGAGACTTCATATGCGATAGCTACTCTGGCGGGGTATCTTTGTGA 1956 0.4233 MDDSGDRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQARTALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKLDKTTSESGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPNGIISNLNTPTGLNGHGFSPSGLLQLGQSQSFNNSSNDQLKFQPTITPVNQNILQGMPMSIGFDHLQNNSSKGVFPVQNLNTDVKPTFPIPNRFPDQIPKVTTSSSHPPSLGISNNGLMLETHTEGKHGGIGIGYGSSSSSVSSRHSDFSFSMLDQGRHSDNWSSVVPLSGIQTNSFPSSDCFRQTAIPPSDNMASLPLQAGYPGGSLADVHSQGSVFTNSPEYINGNLPFQGWEDRNQDATYHSNITYGSINSLAPVNGAVVPRGQTTSNSTLHRNLDTKFCDPRQMKHAGFADLTECSSSRQPRVNIVSQQKFSNNLGSLEYLASSMMEQEQDKMKLLGGDFICDSYSGGVSL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0685 651 MobiDBLite consensus disorder prediction 165 179 - -
Tpr7g0685 651 Gene3D - 11 148 - -
Tpr7g0685 651 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Tpr7g0685 651 SUPERFAMILY CheY-like 11 134 IPR011006 -
Tpr7g0685 651 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Tpr7g0685 651 MobiDBLite consensus disorder prediction 146 164 - -
Tpr7g0685 651 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Tpr7g0685 651 SMART REC_2 12 124 IPR001789 GO:0000160
Tpr7g0685 651 MobiDBLite consensus disorder prediction 131 145 - -
Tpr7g0685 651 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Tpr7g0685 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 5 626 - -
Tpr7g0685 651 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Tpr7g0685 651 CDD REC_typeB_ARR-like 14 128 - -
Tpr7g0685 651 Gene3D - 194 257 - -
Tpr7g0685 651 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Tpr7g0685 651 PIRSF RR_ARR_type-B 1 648 IPR017053 GO:0003677|GO:0003700|GO:0009736
Tpr7g0685 651 MobiDBLite consensus disorder prediction 131 200 - -
Tpr7g0685 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 626 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0685 Tpr-Chr7 6054782 6059531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0685 6 368 Response Regulator Gene Family AT2G25180 57.922 1.20e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Tpr7g0685 Response_reg 2.7e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0685 - K14491 gmx:100809002 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3432 1 38642131 38645809 Tpr7g0685 7 6054782 6059531 PCT