Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0684 ATGTGTCAAGTTCATATCCACTCTTTTTTTCCATTTATAGATAGGTGCAGGTATTACCAAATTAACATTCCTGCAATGGAAACATTGACTCATGAGCTATTGCAGAATCCACAAGAAATTGAAAAACAAAACACTTTTCAAGAAGAAGAAGAAAAAGAAGCAAAGCTAGACACTTTATTGGATCTGAATATTCCTAGTGAAGATTTCGATATTGGGTGCAATTCCGAGTCCAATTTAGCCACCTATTTGGACACAGGTAATTCTTCTAAAACATCATTAGAAAATTACACTCGGGGCTCTGAATCAGAGCCACGGTTTTTTTCTTGCAACTTCTGCAAGAGAAAATTCTATTGTTCACAAGCACTTGGGGGACACCAAAACGCTCACAAAAGAGAGAGGTCAATTGCAAAGAGAAGACAGAGGTTTATAGGAACACATAAGATGAAAGGAACAACTTTTGGTATCCCATTTCTTCAAAACCATTTTCACCATAGTTATGCAAATATGGCATCTTTACTACCAATTCATGGTGTTAATATTAGTAATAGTAGTTTAAGACCACTTGGAATTAAGGCTCACTCCATGATTGATAAGCCTTTTCATAATTCTTCATCAAATGGATTTGGAAGCACTTATTATGGACATCATGATCATGGTTGGTCAAGAACACTTATTAATCAACAACCTGCTGGAATAGGAAAACTAGGCATGGAAACTTACAAGGAAACCGGATTTACATCGCGAGGTAGTCTTGGTCGATTCGAAGGAGTTAAAAAAGACATGCTCAATCCAGGAACTCATATGACCTTGAAGAGTAATCAAGAAGATGTGAAGAACCTTGACTTATCCTTAAAGCTCTAA 861 0.3647 MCQVHIHSFFPFIDRCRYYQINIPAMETLTHELLQNPQEIEKQNTFQEEEEKEAKLDTLLDLNIPSEDFDIGCNSESNLATYLDTGNSSKTSLENYTRGSESEPRFFSCNFCKRKFYCSQALGGHQNAHKRERSIAKRRQRFIGTHKMKGTTFGIPFLQNHFHHSYANMASLLPIHGVNISNSSLRPLGIKAHSMIDKPFHNSSSNGFGSTYYGHHDHGWSRTLINQQPAGIGKLGMETYKETGFTSRGSLGRFEGVKKDMLNPGTHMTLKSNQEDVKNLDLSLKL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0684 286 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Tpr7g0684 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Tpr7g0684 286 Gene3D Classic Zinc Finger 85 153 - -
Tpr7g0684 286 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 25 286 - -
Tpr7g0684 286 SUPERFAMILY beta-beta-alpha zinc fingers 104 134 IPR036236 -
Tpr7g0684 286 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 286 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0684 Tpr-Chr7 6050460 6051502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0684 47 286 C2H2 Transcription Factor Family AT5G10970 35.849 1.34e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0684 - - mtr:MTR_3g106230 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3430 1 38609696 38610897 Tpr7g0684 7 6050460 6051502 PCT