Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0672 ATGACAGAAAATGCTAGTAGAAGTTCAACTGCTTTGTGGAATAAGAAGCCACCCAATGTAAAGAAAAATAAGTTAAGGCCTAAAGAAAAAAACTTAGTGGGACCCTCCTTCCTTATTAAATTGTTGCTAGATCCATTAGAAAAAAGTGCTACATTTGACACAAACCCAACTACAAAAACCCATCACCCCTCCTTCTCCAACACCTCCTCTTGGTTTCACAATAGAACTCTTTATCATAGCTCAAAAACACTTTCTGAAAAGAATACATTTCTTTTCCTAAACATGGCCAGACCACAACAGCGTTACCGAGGCGTCCGACAAAGGCATTGGGGCTCTTGGGTGTCCGAAATTCGCCACCCCATTTTAAAAACAAGAATTTGGCTTGGAACATTTGAAACAGCAGAGGATGCAGCAAGAGCATATGATGAAGCTGCAAGACTAATGTGTGGTACAAGAGCAAGAACAAATTTCCCTTACAATCCAAATGTGTCTCAATCATCATCTTCCAAGCTTCTCTCAGCAACTTTAACTGCTAAACTTCATAGATGCTACATGGCTTCATTGCAAATCACTAGACCAATTTCTCTGCAACAGCCTCAGAAAGAATCTTCACAAAGTGTCATGAATTCCACAAACAATGTTCCTTTGAAAAACAGTGAAGAAATTGACACTACAATGAGACATGAAAATGTGAATGAATCAGAAGGAAATTGGGTTTTCAAGAAAGTTAAAGTTGAAAATTCTCAGCAATTTATTAAGCCTCTTGAAGAAGATCATAATCACATTGAACAAATGATTCAAGAATTGCTTCATTATGGGTCTATTGAACTTTGCTCTATTATTCCATCACAAGCTCATTGA 861 0.3751 MTENASRSSTALWNKKPPNVKKNKLRPKEKNLVGPSFLIKLLLDPLEKSATFDTNPTTKTHHPSFSNTSSWFHNRTLYHSSKTLSEKNTFLFLNMARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNVSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQKESSQSVMNSTNNVPLKNSEEIDTTMRHENVNESEGNWVFKKVKVENSQQFIKPLEEDHNHIEQMIQELLHYGSIELCSIIPSQAH* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0672 286 SUPERFAMILY DNA-binding domain 101 160 IPR016177 GO:0003677
Tpr7g0672 286 Pfam AP2 domain 101 150 IPR001471 GO:0003700|GO:0006355
Tpr7g0672 286 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 95 281 - -
Tpr7g0672 286 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 95 281 - -
Tpr7g0672 286 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
Tpr7g0672 286 MobiDBLite consensus disorder prediction 1 16 - -
Tpr7g0672 286 CDD AP2 100 160 IPR001471 GO:0003700|GO:0006355
Tpr7g0672 286 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Tpr7g0672 286 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Tpr7g0672 286 MobiDBLite consensus disorder prediction 1 28 - -
Tpr7g0672 286 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Tpr7g0672 286 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0672 Tpr-Chr7 5915616 5917900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0672 95 284 AP2-EREBP Transcription Factor Family AT5G25190 64.921 2.25e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g0672 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0672 - - gmx:100804510 273.478