Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0650 ATGGAACTTCAGTTAGGCCTAGCTCTACCAATTCATAGTTCCATTGATGGATTTAATCATAGTGGGAGTGGCTGTTCTGAAAACAAAAAGTATGTCAAAAACAAGCGTAGCTATGAAGAGTCTTTTGGACATTTTTTGAAACCTTTGCCATTATTAGTATGGAGTGGACAGCCAAATGAAGAAGATGATCGCAATAAAAAGATGAACACAAATATTCACACATCAAATAATGAAGGAGAAAATCATTTGGTGGGGTGGCCACCGATTAAATCGTGGAGGAAGAAAGAGCTTCATGATCAGCAGCATCATGGCCATATAAGGATTGATCATAGGATGCAAGGTAATGAAAATCAAGATAGACGATTAAGACCTTTATATGTTAAGGTTAACATGGAAGGGGTTGCCATAGGTAGACAAGTCAATTTAAGGCTTTACAACTCTTATCATACTCTCAAAGACTCATTGATTAACATGTTTGTTAAATACCAAAATTTTGAAGAAGATGGAGTAAACTACACACTCATATTTCAGAATAAACAAGGGGATTGGTTGCTTACCGAACACATACCATGGCAATCCTTTATTGGCACGGTGCGGCGTTTGGCTATATTGGGGAATGAAAAAATGAAAATATTTGACAAATATTAG 648 0.3642 MELQLGLALPIHSSIDGFNHSGSGCSENKKYVKNKRSYEESFGHFLKPLPLLVWSGQPNEEDDRNKKMNTNIHTSNNEGENHLVGWPPIKSWRKKELHDQQHHGHIRIDHRMQGNENQDRRLRPLYVKVNMEGVAIGRQVNLRLYNSYHTLKDSLINMFVKYQNFEEDGVNYTLIFQNKQGDWLLTEHIPWQSFIGTVRRLAILGNEKMKIFDKY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0650 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 207 IPR003311 GO:0005634|GO:0006355
Tpr7g0650 215 Gene3D - 125 214 - -
Tpr7g0650 215 SUPERFAMILY CAD & PB1 domains 124 205 - -
Tpr7g0650 215 ProSiteProfiles PB1 domain profile. 124 214 IPR000270 GO:0005515
Tpr7g0650 215 Pfam AUX/IAA family 168 204 IPR033389 -
Tpr7g0650 215 Pfam AUX/IAA family 31 162 IPR033389 -
Tpr7g0650 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0650 Tpr-Chr7 5730180 5731924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0650 127 210 B3 DNA Binding Superfamily AT3G61830 32.941 9.05e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tpr7g0650 AUX_IAA 1.7e-23 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0650 K14484 - gmx:100783359 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0650 7 5730180 5731924 Tpr7g0650 7 5730180 5731924 ECH