Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0643 ATGGTAGTAGTAGTAGTAACAAAACATTGGTTTTCACCATCCCATGTTTTTGTTCTTGTTCTTTTCATTTCAATCTTCCTCATGTCAAAACCATGTTTCTGTGGTATTCAATATACAGGCCAAATCTTACCTGGTACTCAAGGTTCAGAAATGGATTGGGTTGACAAAGAAGGAAAATTCCTCATCTCAAAAAACCAAAATTTTGTTTTTGGTTTTACCACCACCGCCAATGACACAACCAAGTTTCTATTAGTAATCGTCCATGTACCAAGCTCCAAAGTGATTTGGACTGCTAATAGAGCAAAACCTGTTTCTAATTCTGATGATTTTGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATCGAATTTTGATCTGGTCTACAAACACAATTAACAAAGGGGTTTCTTCAATGATGTTGCAGGATAATGGAAATTTGGTTTTGCTTGGGAGTGATAACAGTACGGTAATTTGGCAAAGTTTTGATTTTCCTACTGATACTTTGTTGCCTGAACAGGTTTTCAAAGAGGGAATGAAACTTACTAGTGAACCTAGTTTGAATAATTTGACCTATGTTCTTGAGATTAAATCTGGTAATGTTGTTCTTTCAGCTGGTTTCAAAATTCCTCAGGTTTATTGGTCTATGGAGAATGATAACCGTAAAATCGTTGATAAGGTTGGTGATGTTGTGGTTTCGGCAAATATAAGTGATAATTCTTGGAGATTTTATGATGACAAAAAGTCTTTGTTGTGGCAATTCATTTTCTCTGATATTGCAGGTGTGAAAAATGCAACTTGGGTTGCTGTTTTGGGAAAGGATGGTGTTATTACTTTCTCTAGTCTTAACAGCGGTGGATCCAACAGTGAGTCATCGACAAGGATACCGCAAGATCCTTGTGCTACACCGGAGCCTTGTGATCCTTACAATATATGCACAGGCAACCGTGCGTGTAGTTGTCCTTCTGTTGTTCCTAGTTGTAAACCTGGTTTTGTTTCTGCTTGTGATGAAAAATCAGAAAAGTCTATCGAATTTCTGAAAGGTGATGATGGGCTTGATTACTTTGCACTTGATTTTCTTCAGCCTTTTTCGAAAACCAATTTGGTAGGTTGTCAAACGTCTTGCCGTGGAAATTGCTCTTGTCTGGCAATGTTTTTTCATAAAAGTTCAGGAAACTGTTTCCTGTTGGAAAGGGTAGGAAGTTTTCAGAAATCTAATGACGGAGATTCTGCTTATGTTTCTTACATTAAGGTCTCAAGCAATGGAAACACAAAAGGAAGTGGAAGTAGCAATAAACACATCATTGTTGTTGTTGTAATTGTCATATTAACTTTGTTTGTAATTTCTCTTCTGCTCTTTGTTGGGGTTAGATACTACAGGAAAAAGAAAAGGTTACCGGAGTCTCCTAGAGAATCAGAAGAGGACAATTTCTTGGAGAATTTAACCGGTATGCCGATCCGTTACCGATACAAAGATCTCGAAGTTGCAACTAATAACTTCTCAGAGAAGCTTGGCTCAGGAGGTTTTGGTTCAGTCTACAAAGGAGTTCTACCTGATGGAACTCAATTAGCTGTGAAGCAGCTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGTTTTTGTGCTGATGGAACACACAGGCTTCTAGTTTATGAGTTTATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAGGCGAATTTCTTTTGGATTGGGATACGAGGTTTAACATAGCAGTAGGAACAGCAAAAGGGCTAGCGTATTTACACGAAGATTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCTGAAAATGTACTCCTTGATGATCATTTCACGGCTAAAGTTTCAGATTTTGGTTTAGCCAAGCTCATGAATAGAGAACAAAGTCATGTTTTTACAACAATGAGAGGAACACGCGGCTACCTTGCACCTGAATGGATAACAAACTACGCTATATCAGAGAAAAGTGATGTATACAGCTATGGAATGGTGTTGCTAGAGATTATCGGAGGAAGGAAGAATTATGACACTAATGAGAGTTCAGAGAAAAGCTATTTTCCTAGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAATGAGAGATATACTTGATTCTGAGCTGAAAATTGATGAGCATGATGATAGGGCTCAATGTGCTATAAGGGTAGCATTGTGGTGCATACAAGAAGACATGTCTATGAGACCTTCAATGACTAAAGTTGTTCAAATGTTGGAAGGTCTTTGTGCTGTTCCTATACCACCAACTAGTTCATATTTGGGTTCTCGGCTTTATGCTACCGCGTTCAAATCATCTAGTGAAGGTGGTAACTCTTCTGCTCCATCAGACGGTAATAGTAATAGTGATGCTTATCTATCGGCAGTTCGTCTTTCTGGCCCAAGATAA 2478 0.3789 MVVVVVTKHWFSPSHVFVLVLFISIFLMSKPCFCGIQYTGQILPGTQGSEMDWVDKEGKFLISKNQNFVFGFTTTANDTTKFLLVIVHVPSSKVIWTANRAKPVSNSDDFVFDKKGNAFLQKDRILIWSTNTINKGVSSMMLQDNGNLVLLGSDNSTVIWQSFDFPTDTLLPEQVFKEGMKLTSEPSLNNLTYVLEIKSGNVVLSAGFKIPQVYWSMENDNRKIVDKVGDVVVSANISDNSWRFYDDKKSLLWQFIFSDIAGVKNATWVAVLGKDGVITFSSLNSGGSNSESSTRIPQDPCATPEPCDPYNICTGNRACSCPSVVPSCKPGFVSACDEKSEKSIEFLKGDDGLDYFALDFLQPFSKTNLVGCQTSCRGNCSCLAMFFHKSSGNCFLLERVGSFQKSNDGDSAYVSYIKVSSNGNTKGSGSSNKHIIVVVVIVILTLFVISLLLFVGVRYYRKKKRLPESPRESEEDNFLENLTGMPIRYRYKDLEVATNNFSEKLGSGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEFMANNSLDKWIFKKKKGEFLLDWDTRFNIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFTAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDTNESSEKSYFPSFAFKMMEEGKMRDILDSELKIDEHDDRAQCAIRVALWCIQEDMSMRPSMTKVVQMLEGLCAVPIPPTSSYLGSRLYATAFKSSSEGGNSSAPSDGNSNSDAYLSAVRLSGPR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0643 825 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0643 825 CDD STKc_IRAK 505 772 - -
Tpr7g0643 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 218 IPR036426 -
Tpr7g0643 825 CDD B_lectin 58 166 IPR001480 -
Tpr7g0643 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 16 825 - -
Tpr7g0643 825 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Tpr7g0643 825 Pfam D-mannose binding lectin 94 176 IPR001480 -
Tpr7g0643 825 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0643 825 PIRSF SRK 11 820 IPR024171 GO:0004674
Tpr7g0643 825 Pfam Protein kinase domain 502 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0643 825 MobiDBLite consensus disorder prediction 796 825 - -
Tpr7g0643 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tpr7g0643 825 Gene3D - 54 164 IPR036426 -
Tpr7g0643 825 ProSiteProfiles Bulb-type lectin domain profile. 46 163 IPR001480 -
Tpr7g0643 825 MobiDBLite consensus disorder prediction 796 817 - -
Tpr7g0643 825 SMART blect_4 52 166 IPR001480 -
Tpr7g0643 825 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Tpr7g0643 825 Gene3D Phosphorylase Kinase; domain 1 463 573 - -
Tpr7g0643 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 16 825 - -
Tpr7g0643 825 SUPERFAMILY Protein kinase-like (PK-like) 480 770 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0643 Tpr-Chr7 5674736 5678079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0643 447 781 Receptor kinase-like Gene Family AT5G20050 45.938 8.37e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr7g0643 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0643 - - gmx:100791158 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0643 7 5674736 5678079 Tpr7g0643 7 5674736 5678079 ECH
Tpr7g0643 7 5674736 5678079 Tpr1g3399 1 38323930 38327657 ECH
Tpr1g3399 1 38323930 38327657 Tpr7g0643 7 5674736 5678079 PCT