Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0636 ATGCCTCAGCTGCTACATGGGACACTTAAGGTAACCATAAGTGAAGTTGATAGGTTGCAAACTGGATGTAATTTGGATTTCTGTCGAAAGGGAACTACAAACAAGGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTCTGTTGTGCAGGCCTGAGGTACATATCTTAACCATATTTTTAAGCAACATGATTCTTCATTTTAATGTAATAATCTTCATTATCTTAACATGCAAACCACTTGTTTTGAAGATTGTTGGGACAAGACTCTATGCAACAGTTGATTTAGATAAAGCAAGAGTTGGACGAACCAGAATGATAGGGAACCAACCCTCAAACCCGAAATGGAATGAGACCTTTGAAATCTATTGTGCTCATTACATATCACACATTGTATTCACTGTCAAAGATGATAATCCAATTGGAGCAACTCTAATTGGAAGAGCTTATATCCCTGCCGAGAAAGTTCTCAAGGGACCTATAATTAACAGATGGGTTGAGATATTAGACGAAGAAGATCATCGTCCTGTACCAGGTGGTTCTAAAATTCGTGTTAGCATGCAATTCTCTAGTGTCCTCGAGGACAGAAAATGTTTATGGTCTCAGGGAATACATATGCCATATTTAGGAGTTTCGCGTACATTTTTTGACCAGAGACAAGGTTGTAGTGTTACTTTTTACCAAGATGCTCATGTCCCTGATAGTGTTCATCCGTGGATTCCGATATCTGGAACAAAATATTATGTTCCTGGAAGATGTTGGGAAGATATTTACAATGCAATTATGGATGCTAAACTCTTTATTTACATAACTGGTTGGTCTGTTCATACTGAAATAACCTTGATTAGGGATTCAAACAAGCCAACAGAAACTAGCACCACCCTTGGAGAAATGCTCAAGAGAAAAGCCAATGAAGGTGTTAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCGGCTTTTAAGAAAGACGGTTTGATGGGAACACATGATCAAGAAACTGCTGAGTATTTTAAAAACACAAAAGTACATTGCGTTTTATGTCCGCGTAACCCTGATGGCGGAAAAAGCATAGTTCAAGGTTTTGAAATTTCAACTATGTTCACTCATCACCAAAAGACTATAGTTGTTGATGGCCATCATGTTGAAGGATCACAGAAGCGAACCGTTATCAGTTTCATAGGTGGTATTGATCTGTGTGATGGGAGATATGATACCATGGAACACCCTTTGTTTTCAACATTGAATACAATCCATCATGATGATTTTCATCAACCAAATTTCCCAGGTGCTTCTATTAAGAAAGGCGGTCCTAGAGAACCGTGGCATGATATTCACTGCAAGCTAGAAGGACCTATTGCATGGGATGTGTTGTACAATTTTGAGCAAAGGTGGGAAAAGCAAGTTGGGAAGGAATTCTTATTCCCAATTGAATTTCTTGACAGAATTCTAATCCACCCTTCTGATGCAATGATATCAGAAGAAGATGGAGATACTTGGAGTGTTCAGTTGTTTAGGTCGATTGATGGTGGCGCTGTTTCAAACTTCCCTCAAGCACCGGATGAAGTTATTGAATTAGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGTATTCAAGATGGTTATATAAATGCTATTCGACAAGCAAAAAACTTCATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCATATGGTTGGCATGCAAGTGATATTAAAGTCGAGGACATTGGTGCTTTGCATCTCATACCAAAGGAGTTGTCATTGAAGATTGTTAGCAAAATTGAAGCTGGAGAAAGGTTTGTTGTGTATGTGGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCCTCAGTTCAGTCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATTCCGACATTGCTGATGCCATAAAAAAGAAGAACATTGAAGCACACCCTCGCGATTATTTGACATTTTATTGCCTTGGCAAAAGGGAAAGTAAGAAAGATGGAGAGTATACTCCTCCAGAGGAACCGGCGCCTGACAGTGACTATCATAGAGCGCAAAAGTCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATGATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGTGCATTCCAACCTCATCATCTAACATCCACATCCACATCCAATATTGGCTCACAAAGACCACAAGGTCAGATTTATGGGTTCAGAAGAGCATTATGGTATGAACATATTGGAGATAACAGTGATGATTTCGACGAGCCTGAAAGTGTGGAATGTGTGAAACTTGTGAATCGTGTTGCCGAGAGGAATTGGAAATTATATTGTGATGATACATTGGATGAAAGTGTAAATACTCACCTTTTGAGGTATCCTGTTGAAGTTGGTGAAGATGGAAGTGTAACATCACTTCCTGGGATGAAATATTTTCCTGATACAATGGCTTTGATTCTTGGTTCAAAATCTGATTACCTTCCTCCCATACTTACCACCTAG 2571 0.3909 MPQLLHGTLKVTISEVDRLQTGCNLDFCRKGTTNKGKRFLAQVKGCLLCRPEVHILTIFLSNMILHFNVIIFIILTCKPLVLKIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHYISHIVFTVKDDNPIGATLIGRAYIPAEKVLKGPIINRWVEILDEEDHRPVPGGSKIRVSMQFSSVLEDRKCLWSQGIHMPYLGVSRTFFDQRQGCSVTFYQDAHVPDSVHPWIPISGTKYYVPGRCWEDIYNAIMDAKLFIYITGWSVHTEITLIRDSNKPTETSTTLGEMLKRKANEGVKVLMLVWDDRTSVPAFKKDGLMGTHDQETAEYFKNTKVHCVLCPRNPDGGKSIVQGFEISTMFTHHQKTIVVDGHHVEGSQKRTVISFIGGIDLCDGRYDTMEHPLFSTLNTIHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKEFLFPIEFLDRILIHPSDAMISEEDGDTWSVQLFRSIDGGAVSNFPQAPDEVIELGLVSGKDNIIDRSIQDGYINAIRQAKNFIYIENQYFLGSSYGWHASDIKVEDIGALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGIPESASVQSILDWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFYCLGKRESKKDGEYTPPEEPAPDSDYHRAQKSRRFMIYVHSKMMIVDDEYIMIGSANINQRSMDGGRDTEIAMGAFQPHHLTSTSTSNIGSQRPQGQIYGFRRALWYEHIGDNSDDFDEPESVECVKLVNRVAERNWKLYCDDTLDESVNTHLLRYPVEVGEDGSVTSLPGMKYFPDTMALILGSKSDYLPPILTT* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0636 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Tpr7g0636 856 SUPERFAMILY Phospholipase D/nuclease 541 733 - -
Tpr7g0636 856 Pfam C2 domain 87 166 IPR000008 -
Tpr7g0636 856 PIRSF PLD_plant 1 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tpr7g0636 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 189 IPR035892 -
Tpr7g0636 856 PANTHER PHOSPHOLIPASE D ALPHA 3 3 856 - -
Tpr7g0636 856 Gene3D C2 domain 76 200 IPR035892 -
Tpr7g0636 856 ProSiteProfiles C2 domain profile. 50 165 IPR000008 -
Tpr7g0636 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 367 404 IPR001736 GO:0003824
Tpr7g0636 856 Pfam Phospholipase D Active site motif 367 404 IPR001736 GO:0003824
Tpr7g0636 856 Pfam Phospholipase D Active site motif 696 722 IPR001736 GO:0003824
Tpr7g0636 856 Gene3D Endonuclease Chain A 512 744 - -
Tpr7g0636 856 PANTHER PHOSPHOLIPASE D 3 856 IPR015679 -
Tpr7g0636 856 Pfam Phospholipase D C terminal 775 846 IPR024632 -
Tpr7g0636 856 CDD C2_plant_PLD 1 188 - -
Tpr7g0636 856 SMART pld_4 367 404 IPR001736 GO:0003824
Tpr7g0636 856 SMART pld_4 695 722 IPR001736 GO:0003824
Tpr7g0636 856 Gene3D Endonuclease Chain A 241 477 - -
Tpr7g0636 856 SUPERFAMILY Phospholipase D/nuclease 212 476 - -
Tpr7g0636 856 SMART C2_3c 69 164 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0636 Tpr-Chr7 5612921 5616954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0636 3 856 Phospholipase D Gene Family (Wang group) AT3G15730 60.419 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0636 K01115 - gmx:100794115 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0636 7 5612921 5616954 Tpr7g0636 7 5612921 5616954 ECH