Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0635 ATGGTACAACAAACAAAGAAGTTCAGAGGAGTCAGGCAACGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCACCCTTTGTTAAAGAGAAGGGTGTGGCTAGGGACATTTGAGACAGCAGAAGCAGCAGCAAGAGCATATGATCAAGCTGCAATTTTGATGAATGGTCAAAGTGCTAAGACTAATTTTCCAAAGAAACAAGGTGAAGATGATTCTGCTATTGACACCTCTTCTAATAACAATGGTGGTGGTGATGATTCTTTCTTGTCTCCCAAGGCACTTTCTGAGTTACTTAGTACTAAGCTTAGGAAGTATTGTAAAGACCCTTCTCCTTCACTTACTTGTTTGAGGCTAGATAATGATAATTCTCATATTGGAGTGTGGCAAAAAAGAGCTGGAACACATTCTGATTCTAATTGGGTCATGAGAGTTGAACTTGGTGGGAAGAAAAAGACAGTAGAATCAGAGATAGGGTCAAAAGAAGATGTTATTGATGGTGGTAGTAATAATGGTAATGCTGATGATATTCAAAATAGGGTGATAGTAGAAGAAGAGGAAAGAGTTGCTTTGCAGATGATTGAAGAGTTACTTAATTGGAATTATCCATGTGGTTCAACTTCAAGTAATTAA 630 0.3905 MVQQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQSAKTNFPKKQGEDDSAIDTSSNNNGGGDDSFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDNDNSHIGVWQKRAGTHSDSNWVMRVELGGKKKTVESEIGSKEDVIDGGSNNGNADDIQNRVIVEEEERVALQMIEELLNWNYPCGSTSSN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0635 209 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Tpr7g0635 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 206 - -
Tpr7g0635 209 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Tpr7g0635 209 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Tpr7g0635 209 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Tpr7g0635 209 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Tpr7g0635 209 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Tpr7g0635 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 206 - -
Tpr7g0635 209 MobiDBLite consensus disorder prediction 61 88 - -
Tpr7g0635 209 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Tpr7g0635 209 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0635 Tpr-Chr7 5607487 5608625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0635 4 202 AP2-EREBP Transcription Factor Family AT5G25390 59.799 1.15e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g0635 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0635 - - lang:109326202 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0635 7 5607487 5608625 Tpr7g0635 7 5607487 5608625 ECH
Tpr7g0635 7 5607487 5608625 Tpr1g3395 1 38281961 38282895 ECH
Tpr4g3665 4 42590602 42592477 Tpr7g0635 7 5607487 5608625 ECH