Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0625 ATGGCGGTGGCGATTCAATGTCTATCGTGTGCTCGTTTCGTCACTGTCGGAGGAAACCGATCCTATCCACTACAACGAAAACCTCTTCTCTTCTCCGCCACTCTTTCTTCTCGCTCTCTGAACCTTCACTCCTCAATTGTCACTGCCTCTTCCAAAAAGAAAACCAACAAGAAAAAATCATCTCATGTTACCGAAGGGAACGATGAAGAGGAAGACGCGTTTGAGTTGCTCTTCAAGCAACTCGAAGAAGATCTCAAAAATGACGATGGCGGTGACGACGATGACGATGATGATATAACTGAAGAAGAAATGGCTTTATTTGAACATGAATTAGAAGGTCTGTTAGGTGAATTAGATGATGATGATGATGAATTGTCGGACTCAGATAGCAGTGAAACAGAAGCTGATAATGATGCTGAAAAAACTAGTGCTGATGGAAATGAGAATTCACTGAAGCTTAGAACTTGGCAATTGAATAAATTGGCTAGAGCCTTGAAAACTGGACGCCGCAAAATAAGTGTAAAAGCCCTTGCTGCTGATGTCTGTCTGGATAGATCTCTCGTTCTTAATTTGCTCCGTAACCCTCCTCCGAATCTTCTGATGCTGAGCCTATCGATACCTGATGAACCCACACCATCAGCAATAGTACCTGAAACTACACCCGGGGAGACTCTTTATAAAGAAACAAGTGCAGACCATGCAGATCATGCAGAATCTGAGCCAAAGTCTGACTTACCTATTCATACCATGCAACAGAATTGGTCATCTCGAAAGAGATTGAAAAAGGCCCAACTTGACACTCTGGAGAGAGTTTACATGAGATCAAAGCGACCCACTAATGCAATGATAAGCAGTATCGTGCATGTTACAAACATTCCACGGAAAAAGGTTATTAAGTGGTTCGAAGACAGACGTGCTGAGGAGGGAGTTCCAGAACGCCGTCTTCCTTACCAGCACTCTGCTCATGAAACTGGTTGA 978 0.4346 MAVAIQCLSCARFVTVGGNRSYPLQRKPLLFSATLSSRSLNLHSSIVTASSKKKTNKKKSSHVTEGNDEEEDAFELLFKQLEEDLKNDDGGDDDDDDDITEEEMALFEHELEGLLGELDDDDDELSDSDSSETEADNDAEKTSADGNENSLKLRTWQLNKLARALKTGRRKISVKALAADVCLDRSLVLNLLRNPPPNLLMLSLSIPDEPTPSAIVPETTPGETLYKETSADHADHAESEPKSDLPIHTMQQNWSSRKRLKKAQLDTLERVYMRSKRPTNAMISSIVHVTNIPRKKVIKWFEDRRAEEGVPERRLPYQHSAHETG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0625 325 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 33 320 - -
Tpr7g0625 325 Gene3D - 252 314 - -
Tpr7g0625 325 SUPERFAMILY Homeodomain-like 252 319 IPR009057 -
Tpr7g0625 325 MobiDBLite consensus disorder prediction 51 71 - -
Tpr7g0625 325 PANTHER HOMEOBOX PROTEIN 8 33 320 - -
Tpr7g0625 325 ProSiteProfiles 'Homeobox' domain profile. 251 311 IPR001356 GO:0003677
Tpr7g0625 325 MobiDBLite consensus disorder prediction 305 325 - -
Tpr7g0625 325 Pfam Homeodomain 256 307 IPR001356 GO:0003677
Tpr7g0625 325 MobiDBLite consensus disorder prediction 117 134 - -
Tpr7g0625 325 MobiDBLite consensus disorder prediction 117 148 - -
Tpr7g0625 325 CDD homeodomain 254 306 IPR001356 GO:0003677
Tpr7g0625 325 SMART HOX_1 253 315 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0625 Tpr-Chr7 5515462 5518546 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr7g0625 Homeodomain 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0625 - - gmx:100798718 332.413