Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0623 ATGGCGGTGGCGATTCAATGTCTATCGTGTGCTCGTTTCGTCACTGTCGGAGGAAACCGATCCTATCCACTACAACGAAAACCTCTTCTCTTCTCCGCCACTCTTTCTTCTCGCTCTCTGAACCTTCACTCCTCAATTGTCACCGCCTCTTCCAAAAAGAAAACCAACAAGAAAAAATCATCTCATGTTACCGAAGGGAACGATGAAGAGGAAGACGCGTTTGAGTTGCTCTTCAAGCAACTCGAAGAAGATCTCAAAAACGACGATGGCGGTGATGATGACGACGATGGCGGTGATGATGACGACGATGATGATGATATAACTGAAGAAGAAATGGCTTTATTTGAACATGAATTAGAAGGTCTGTTAGGTGAATTAGATGATGATGATGATGAATTGTCGGACTCAGATAGCAGTGAAACAGAAGCTGATAATGATGCTGAAAAAACTAGTGCTGATGGAGATGAGAATTCACTGAAGCTTAGAACTTGGCAATTGAATAAATTGGCTAGAGCCTTGAAAACTGGACGCCGCAAAATAAGTGTAAAAGCCCTTGCTGCTGATGTCTGTCTTGATAGATCTCTCGTTCTTAATTTGCTCCGTAACCCTCCTCCGAATCTTCTGATGCTGAGCCTATCGATACCTGATGAACCCACACCATCAGCAATAGTACCTGAAACTACGCCCGGGGAGACTCTTTATAAAGAAACAAGTGCAGACCATGCAGAATCTGAACCAAAGTCTGACTTACCTATTCATACCATGCAACAGAATTGGTCATCTCGAAAGAGATTGAAAAAGGCCCAACTTGACACTCTGGAGAGAGTTTACATGAGATCAAAGCGACCCACTAATGCAATGATAAGCAGTATCGTGCATGTTACAAACATTCCACGGAAAAAGGTTATTAAGTGGTTCGAAGACAGACGTGCTGAGGAGGGAGTTCCAGAACGCCGTCTTCCTTACCAGCACTCTGCTCATGAAACTGGTTGA 993 0.4381 MAVAIQCLSCARFVTVGGNRSYPLQRKPLLFSATLSSRSLNLHSSIVTASSKKKTNKKKSSHVTEGNDEEEDAFELLFKQLEEDLKNDDGGDDDDDGGDDDDDDDDITEEEMALFEHELEGLLGELDDDDDELSDSDSSETEADNDAEKTSADGDENSLKLRTWQLNKLARALKTGRRKISVKALAADVCLDRSLVLNLLRNPPPNLLMLSLSIPDEPTPSAIVPETTPGETLYKETSADHAESEPKSDLPIHTMQQNWSSRKRLKKAQLDTLERVYMRSKRPTNAMISSIVHVTNIPRKKVIKWFEDRRAEEGVPERRLPYQHSAHETG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0623 330 PANTHER HOMEOBOX PROTEIN 8 33 325 - -
Tpr7g0623 330 MobiDBLite consensus disorder prediction 310 330 - -
Tpr7g0623 330 Gene3D - 257 319 - -
Tpr7g0623 330 MobiDBLite consensus disorder prediction 51 71 - -
Tpr7g0623 330 ProSiteProfiles 'Homeobox' domain profile. 256 316 IPR001356 GO:0003677
Tpr7g0623 330 CDD homeodomain 259 311 IPR001356 GO:0003677
Tpr7g0623 330 SUPERFAMILY Homeodomain-like 257 324 IPR009057 -
Tpr7g0623 330 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 33 325 - -
Tpr7g0623 330 SMART HOX_1 258 320 IPR001356 GO:0003677
Tpr7g0623 330 MobiDBLite consensus disorder prediction 125 142 - -
Tpr7g0623 330 Pfam Homeodomain 261 312 IPR001356 GO:0003677
Tpr7g0623 330 MobiDBLite consensus disorder prediction 125 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0623 Tpr-Chr7 5466684 5469721 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr7g0623 Homeodomain 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0623 - - gmx:100798718 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0623 7 5466684 5469721 Tpr7g0623 7 5466684 5469721 ECH