Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0619 ATGGCTGTAGCGATTCAAAGTCTATCATGTGCTCGTTTCGTCACTTTCGGAGGAAACCGATCTTTTCCTTTGCAACCAAAACCTCTTCCCTTCTCCATCACTCTTTCTTCAAACTCTCCGAATCTCATTGTCACCGCCTCTTCCAAAAACAAAAACAAAAACAAAAAGCAACAACAAGGGAACGATGAAGAGGAAGACGCCTTTGAGTTGCTCTTCAAGCAACTCGAAGAAGATCTCAAAAACGACGATGGCGGTGATGACGACGACGATGATGATATAACTGAAGAAGAAATGGCTTTATTTGAACATGAATTAGAAGGTCTGTTAGGTGAATTAGATGATGATGATGATGATGAATTGTCGGACTCAGATAGCAGTGAAACAGAAGCTGATAATGATGCTGAAAAAACTAGTGCTGATGGAAATGAGAATTCACTGAAGCTTAGAACTTGGCAATTGAATAAATTGGCTAGAGCCTTGAAAACTGGACGCCGCAAAATAAGTGTAAAAGCCCTTGCTGCTGATGTCTGTCTTGATAGATCTCTCGTTCTTAATTTGCTCCGTAACCCTCCTCCGAATCTTCTGATGCTGAGCCTATCGATACCCGATGAACCCACACCATCAGCAATAGTACCTGAAACTACACCCGGGGAGACTCTTTATAAAGAAACAAGTGCAGATCATGCAGAATCTGAACCAAAGTCTGACTTACCTATTCATACCATGCAACAGAATTGGTCATCTCGAAAGCGATTGAAAAAGGCCCAACTTGACACTCTGGAGAGAGTTTACATGAGATCAAAGCGACCCACTAATGCAATGATAAGCAGTATCGTGCATGTTACAAACATTCCACGGAAAAAGGTTATTAAGTGGTTCGAAGACAGACGTGCTGAGGAGGGAGTTCCAGAACGCCGTCTTCCTTACCAGCACTCTGCTCATGAAACTGGTTGA 954 0.4256 MAVAIQSLSCARFVTFGGNRSFPLQPKPLPFSITLSSNSPNLIVTASSKNKNKNKKQQQGNDEEEDAFELLFKQLEEDLKNDDGGDDDDDDDITEEEMALFEHELEGLLGELDDDDDDELSDSDSSETEADNDAEKTSADGNENSLKLRTWQLNKLARALKTGRRKISVKALAADVCLDRSLVLNLLRNPPPNLLMLSLSIPDEPTPSAIVPETTPGETLYKETSADHAESEPKSDLPIHTMQQNWSSRKRLKKAQLDTLERVYMRSKRPTNAMISSIVHVTNIPRKKVIKWFEDRRAEEGVPERRLPYQHSAHETG* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0619 317 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 40 312 - -
Tpr7g0619 317 MobiDBLite consensus disorder prediction 45 68 - -
Tpr7g0619 317 SUPERFAMILY Homeodomain-like 244 311 IPR009057 -
Tpr7g0619 317 SMART HOX_1 245 307 IPR001356 GO:0003677
Tpr7g0619 317 MobiDBLite consensus disorder prediction 111 129 - -
Tpr7g0619 317 ProSiteProfiles 'Homeobox' domain profile. 243 303 IPR001356 GO:0003677
Tpr7g0619 317 PANTHER HOMEOBOX PROTEIN 8 40 312 - -
Tpr7g0619 317 MobiDBLite consensus disorder prediction 297 317 - -
Tpr7g0619 317 Gene3D - 244 306 - -
Tpr7g0619 317 Pfam Homeodomain 248 299 IPR001356 GO:0003677
Tpr7g0619 317 CDD homeodomain 246 298 IPR001356 GO:0003677
Tpr7g0619 317 MobiDBLite consensus disorder prediction 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0619 Tpr-Chr7 5340076 5342415 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr7g0619 Homeodomain 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0619 - - lja:Lj0g3v0337679.1 311.227