Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0602 ATGATGTCTGAAAGCAACTACAATGCCTTAGGTGATGATGACAGAATCCTTCTAAACATGATGCAAAATGATAATGAAGATAGTTTTCTCTCGGATCGGCGCAATGTTTTTGCCGTGGATCAGGACAATTGCAGCCAATTCAGCCTCACCGATTTTACCTATCCTCCCTTCCCCTACACACCAACCACCAGGAGGAGGAATAGACTCCACAGGAATGTTATCTCCCCCCATAACCCTCATTATAGGTCGTGGCAGCTGCTTCTGGCGCTGTTAGTTTTCTACAGTGCATGGATGTCACCATTTGAATTTGGGTTCTTGGATGAACCTTTGTTACCTCTTTCGATTATTGATAATGCTGTGAATTTTTTATTTTGCATTGACATCGTTTTAACCTTCTTTGTTGCGTATTATGACAACTCTACATGCGTGCTTGTGGATAATCGTGGGCAAATTGCGAGGAGTTATCTGAAATCATGGTTTATGCTTGACGTCATTTCCACGATTCCTTATGAACTTGTCCATCAAATATTGCCTCATGACGTCCAAATTTATGGCTACTTCGGTATGCTTCGCCTTTGGCGTCTTCATAGAGTCAGTGCCTTGTTTGCAAGATTAGAAAAGGACAAAACTTATAACTACTTCTTGTTGCGGTGTGCAAAGCTTACGTGTGTTACTCTATTTGACATTCATTTCGGTGCCTGTATTTTCTTCTTTCTTGGCAACCGTTTTGTCGAAGACCGAAGTACAACGTGGCTTGGGCTTATTACTGATGTGGATGACAAGAATATCATGTCTCTCTACGTAACATCAGTATACTGGGCAATAATCACACTAGCAACAGTTGGTTATGGTGATCTACATGCTGTAAATACAAGGGAGATGGTATTTGTGATTTTCTATATCCTCTTTAATGTGGCACTTACATCATACGTCATCGGAAACATGACAAATTTAGTTGTTCAATCCACAAGCAGAACTAGGAAATATAGGGAAACAGTGAAAGCTGCCTCAAAATTTGCTCATCGAAATCAAATACCTACCCGGTTGGAAGAACAGATGCTTGCTCAGTTGCTTATGAAGTATAGAACTGATTTAGAAGGAGTGCAACACCAAGATATTATTGATTCCCTTCCAAAAGCGATTCGATCTAGTGTCTACTACTGCTTATTCTATCCAATGATGAACAAAGTTTACTTGTTTACGGGAGTGTCAACAGACCTCATTTTTCAATTGGTCACGGAGGTGAAGGCGGAGTATTTTCCTCCGAAGGAAGATGTTGTTTTGGAGAATGAAGCACCAACGGACTTTTATATCTTTGTCACCGGTGGTGCAGAACTTATCAAACAAGTGAATGGAGTAGAACAGGTCGTTGGTAAGATAAGTGCAAGACAGTTAGTTGGCGAAGTAGGAGTTCTAGGTTACATACCGCAGCCATATTCATCTCGAACTAATCGATTGAGTCAAATTTTGCGCTTGGAGCGTACTGCATTTCTAAACCTTGTTCGTTCAAGTGTTGGAGATGGGGCAATAATCATGAATAATTTTCTCAATCATTTGGAAACTTCCGATATTCAAGGGATGGATGCTATTTTTGCAGAAATAATGGCCATGTTGGCTCAAGGTAAAACAGATCTGCCTATCAGCACATGCTTTGCAGTAAGCAGAAATGACAACATATTGTTACGTCGGTTGCTGAAGAAAGGTTCAGATCCAAATGAAGCAGACAGAACTGGAAGGACAGCATTGCATATTGCAGCTTCTAATGGCGACGAGAATTGTGTAACTTTGCTTTTACAGTTTGGTGCTGATCCAAATAGAAAAGATTTGAAAGGCAGTATCCCATTATGGGAAGCAATGAGCGGGGGACATCAATTTGTCAAGAAAATTCTCATAGACAATGGAGCAAACATATTCTGTACTGATGTAACGCGTTTAGCATGTGTTGCAGCTCAGAAAAATAACACTGAATTGCTCATGGAACTCGTAGAATTTGGTGTGGATGTGACAAAATCCGATAAAAGTGGAACCACTGCCCTGCATACAGCAGTAAGTGAAGGAAATGTAGAGATTGTGAAGCTACTTGTAGACCTAGGAGCTGAAGTTGATAAGCTAGATAATTCTGGTTGGAGTCCAAGGCATTTAGCCGAACAACAAGATCACGAAGAAATTAAAAATATATTTCAGAAAATTAAAGAGAACAAACAAAAAGAATCTACTATTCCAATACCAGATAATGGTAAGCCTGATGTGCCTTACACAGGAAATTTTGATAGTGAACATGTTATACCTGATATTGTTGGATTTCAATCCCAAGAAAGCTTGCTACAACCACATATTCAAGACGAGTTGCCATGTTTAGATGATCATCAAAGACGAAGAGCCAACACCTATCATAATTCAATTTTCGGGATGATCTCTGCTGCTAATCGTAATAAAAAAGATCGTGAGGCGTACGAAAGAAACACCGATAAAGCTGCAGACATGAAAAGATTAATAGCTAGAGTGACACTTAGTTGTCCTCAAATAGGTAAACATGGTGGAAAGCTTACTTTTGTGCCTGAGTCCCTTGAAGAACTGCTAGACATTGGTGCCAAAATGTTTGATTTCTCACCCACCAAAGTTTTGACCAAAGAAGGAGCTGAAATTGATGATATAGATCTTATAAGAGATGGTGATCACCTTATTATTGCCACTGACTGA 2700 0.3981 MMSESNYNALGDDDRILLNMMQNDNEDSFLSDRRNVFAVDQDNCSQFSLTDFTYPPFPYTPTTRRRNRLHRNVISPHNPHYRSWQLLLALLVFYSAWMSPFEFGFLDEPLLPLSIIDNAVNFLFCIDIVLTFFVAYYDNSTCVLVDNRGQIARSYLKSWFMLDVISTIPYELVHQILPHDVQIYGYFGMLRLWRLHRVSALFARLEKDKTYNYFLLRCAKLTCVTLFDIHFGACIFFFLGNRFVEDRSTTWLGLITDVDDKNIMSLYVTSVYWAIITLATVGYGDLHAVNTREMVFVIFYILFNVALTSYVIGNMTNLVVQSTSRTRKYRETVKAASKFAHRNQIPTRLEEQMLAQLLMKYRTDLEGVQHQDIIDSLPKAIRSSVYYCLFYPMMNKVYLFTGVSTDLIFQLVTEVKAEYFPPKEDVVLENEAPTDFYIFVTGGAELIKQVNGVEQVVGKISARQLVGEVGVLGYIPQPYSSRTNRLSQILRLERTAFLNLVRSSVGDGAIIMNNFLNHLETSDIQGMDAIFAEIMAMLAQGKTDLPISTCFAVSRNDNILLRRLLKKGSDPNEADRTGRTALHIAASNGDENCVTLLLQFGADPNRKDLKGSIPLWEAMSGGHQFVKKILIDNGANIFCTDVTRLACVAAQKNNTELLMELVEFGVDVTKSDKSGTTALHTAVSEGNVEIVKLLVDLGAEVDKLDNSGWSPRHLAEQQDHEEIKNIFQKIKENKQKESTIPIPDNGKPDVPYTGNFDSEHVIPDIVGFQSQESLLQPHIQDELPCLDDHQRRRANTYHNSIFGMISAANRNKKDREAYERNTDKAADMKRLIARVTLSCPQIGKHGGKLTFVPESLEELLDIGAKMFDFSPTKVLTKEGAEIDDIDLIRDGDHLIIATD* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0602 899 Gene3D - 546 729 IPR036770 -
Tpr7g0602 899 ProSiteProfiles Ankyrin repeat region circular profile. 674 706 - -
Tpr7g0602 899 ProSiteProfiles Ankyrin repeat region circular profile. 577 608 - -
Tpr7g0602 899 SUPERFAMILY Voltage-gated potassium channels 76 320 - -
Tpr7g0602 899 PANTHER POTASSIUM CHANNEL AKT1 37 898 IPR045319 GO:0005249|GO:0006813
Tpr7g0602 899 SUPERFAMILY Ankyrin repeat 551 728 IPR036770 -
Tpr7g0602 899 Pfam KHA, dimerisation domain of potassium ion channel 834 896 IPR021789 -
Tpr7g0602 899 ProSiteProfiles Ankyrin repeat profile. 674 706 IPR002110 GO:0005515
Tpr7g0602 899 ProSiteProfiles KHA domain profile. 834 899 IPR021789 -
Tpr7g0602 899 PRINTS EAG/ELK/ERG potassium channel family signature 94 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0602 899 PRINTS EAG/ELK/ERG potassium channel family signature 117 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0602 899 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0602 899 PRINTS EAG/ELK/ERG potassium channel family signature 311 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0602 899 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Tpr7g0602 899 PRINTS Ankyrin repeat signature 578 593 IPR002110 GO:0005515
Tpr7g0602 899 PRINTS Ankyrin repeat signature 690 704 IPR002110 GO:0005515
Tpr7g0602 899 Gene3D Jelly Rolls 365 524 IPR014710 -
Tpr7g0602 899 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 37 898 - -
Tpr7g0602 899 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Tpr7g0602 899 SUPERFAMILY cAMP-binding domain-like 324 518 IPR018490 -
Tpr7g0602 899 Pfam Ion transport protein 82 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr7g0602 899 Pfam Cyclic nucleotide-binding domain 419 503 IPR000595 -
Tpr7g0602 899 CDD CAP_ED 399 512 IPR000595 -
Tpr7g0602 899 Gene3D - 82 321 - -
Tpr7g0602 899 Pfam Ankyrin repeats (3 copies) 551 641 IPR002110 GO:0005515
Tpr7g0602 899 Pfam Ankyrin repeats (3 copies) 648 723 IPR002110 GO:0005515
Tpr7g0602 899 SMART cnmp_10 399 516 IPR000595 -
Tpr7g0602 899 SMART ANK_2a 640 670 IPR002110 GO:0005515
Tpr7g0602 899 SMART ANK_2a 610 639 IPR002110 GO:0005515
Tpr7g0602 899 SMART ANK_2a 544 573 IPR002110 GO:0005515
Tpr7g0602 899 SMART ANK_2a 577 606 IPR002110 GO:0005515
Tpr7g0602 899 SMART ANK_2a 674 703 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0602 Tpr-Chr7 5191004 5195955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0602 45 899 Ion Channels AT2G25600 51.106 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0602 K21867 - gmx:100802964 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0602 7 5191004 5195955 Tpr7g0602 7 5191004 5195955 ECH
Tpr1g3380 1 38175795 38180793 Tpr7g0602 7 5191004 5195955 PCT