Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0598 ATGAATGATGCTTCAACACAAAACAAAACAATGGAGATTAAGCTCGAGAAATTAAACACAATACTCATAAAACCCTCAAAACCTACACCATCACATCTTCAAACTTTCAAAGTCTCATTACTAGATCAAGTTTGTCCTAATAATCATATCAACGGCACTTTCTTCTACCCAAATAACAATAACAATAATCATAACCACCATTTTTCTGATTTTTCCAATAAATCAAAAATTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTTTCGCCGGCCGTCTACATGACGACACCACCATTCACTGTAACGACAACGGCGTTTTCTTCATCGAATCACAAACAACCACCACTCTCTTCGAAATTCTCACCAATCCTAATTTCAAAACACTAGAATGCTTCCCCCCAACCACTGAGGAGAAACAAAATATGTTGTTACTACTCCGATTCACCTTGTTCAGTTGCGGTTCCACCGCAATTACCATCTCCATCACACACAGGATCGCTGACACCAACACAGTAATCAGTTTTCTCAACACTTGGACAGCAATCACCACCGGAAATGAAATTGTTCCACTCCCTGATTTAACCGTCGCCGCTGCTCTTTTTCCTCCGAGAGAAATTCCCGGCATGTCTTCTGGTTCCGTTAAAACTTCCGATGCAAAATTCACTACTAGAAGATTCATTTTCAAAGCATCCAAAATAGAAGAACTAAAGATAAAAATCAAAAACAAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTCTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAACAGCAGTTTCTGGTTCCAAAACGACGTCGTCGATTTTGTTCCAAGCAATGAACCTCCGTACACGGATGAACATACCAGAGAATGTAGTTGGGACCTTAGCTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCACGTGGCATTAGATGAGATGGTGAAAAGAATGAGGAAGGGTGTAATGGACTTTATAGAGAATAAAGTAGAGAGGTTTAAAGAAGAAGGTGGGTTTAAGGTTGTGGTGGAGAATTTGAAAGAGAGGGTTGAGATTTTGAAAAGGAACAATGAGAATGAGGGTAGTTTGGTAATTTACAACAGTTCGAGTTGGTGTAAATTTCCAGTGCTTGAGTTTGATTTTGGGTGGGGGAAACCTGTGTGGTGTTGTAGTGTGCATATTAATTTGGCGAGTAATTTTATTTATTTGATGGATACAAAAAATGGTGGTGGAATTGAAGCTTTCGTTACTCTTGTTGAAGATGAGATGAAATTGTTTCAACAAAATCAGGAGCTGCTTCACTATGCTGTGCTTAATCCTACAACAACTCTTATTTCAACTTCAAAGCTATAA 1374 0.3886 MNDASTQNKTMEIKLEKLNTILIKPSKPTPSHLQTFKVSLLDQVCPNNHINGTFFYPNNNNNNHNHHFSDFSNKSKILQNSLSQTLSHFYPFAGRLHDDTTIHCNDNGVFFIESQTTTTLFEILTNPNFKTLECFPPTTEEKQNMLLLLRFTLFSCGSTAITISITHRIADTNTVISFLNTWTAITTGNEIVPLPDLTVAAALFPPREIPGMSSGSVKTSDAKFTTRRFIFKASKIEELKIKIKNKFEFHPSRVEVVLALIWKCALSASTAVSGSKTTSSILFQAMNLRTRMNIPENVVGTLAWPFWVTVEEESHVALDEMVKRMRKGVMDFIENKVERFKEEGGFKVVVENLKERVEILKRNNENEGSLVIYNSSSWCKFPVLEFDFGWGKPVWCCSVHINLASNFIYLMDTKNGGGIEAFVTLVEDEMKLFQQNQELLHYAVLNPTTTLISTSKL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0598 457 Coils Coil 1 21 - -
Tpr7g0598 457 PANTHER VINORINE SYNTHASE-RELATED 12 448 - -
Tpr7g0598 457 Gene3D - 11 211 IPR023213 -
Tpr7g0598 457 Pfam Transferase family 14 439 - -
Tpr7g0598 457 Coils Coil 350 370 - -
Tpr7g0598 457 Gene3D - 221 443 IPR023213 -
Tpr7g0598 457 PANTHER F21J9.9 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0598 Tpr-Chr7 5135517 5138857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0598 13 435 Monolignol Biosynthesis Gene Families AT5G48930 22.777 6.29e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0598 - - mtr:MTR_2g007880 603.594