Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0593 ATGAATGATGCTTCAACACAAAACAAAACAATGGAGATTAAGCTCGAGAAATTAAACACAATACTCATAAAACCCTCAAAACCTACACCATCACATCTTCAAACTTTCAAAGTCTCATTACTAGATCAAGTTTGTCCTAATAATCATATCAACGGCACTTTCTTCTACCCAAATAACAATAACAATAACAATAATCATAACCACCATTTTTCTGATTTTTCCAATAAATCAAAAATTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTTTCGCTGGCCATCTACATGACGACACCACCATTCACTGTAACGACAACGGCGTTTTCTTCATCGAATCACAAACAACCACCACTCTCTCCGAAATTCTCACCAATCCTAATTTCAAAACACTAGAATGCTTCCCCCCAACCACTGAGGAGAAACAAAATATGCTGTTACTACTCCGATTCACCTTGTTCAGTTGCGGTTCCACCGCAATTACCATCTCCATCACACACAGGATCGCTGACACCAACACAGTAATCAGTTTTCTCAACACTTGGACAGCAATCACCAGCGGAAATGAAATTGTTCCACTCCCTGATTTAACCGTCGCCGCTGCTCTTTTTCCTCCGAGAGAAATTCCCGGCATGTCTTCTGGTTCCGTTAAAACTTCCGATGCAAAATTCACTACTAGAAGATTCATTTTCAAAGCATCCAAAATAGAAGAACTAAAGATAAAAATCAAAAACAAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTCTAGCTCTGATTTGGAAATGTGCTCTTTCGGCGGCATCAACAGCAGTTTCTGGTTCCAAAACGACGTCGTTTAAGCCTTCGATTTTGTTCCAAGCAATGAACCTCCGTACACGGATGTACATACCAGAGAATGTAGTTGGGACCTTGGCTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCACGTGGCATTAGATGAGATGGTGAAAAGAATGAGGAAGGGTGTAATGGACTTTATAGAGAATAAAGTAGAGAGGTTTAAAGAAGAAGGTGGGTTTAAGGTTGTGGTGGAGAATTTGAAAGAGAGGGTTGAGATTTTGAAAAGGAACAATGAGAATGAGGGTAGTTTGGTAATTTACAACAGTTCGAGTTGGTGTAAATTTCCAGTGCTTGAGTTTGATTTTGGGTGGGGGAAACCTGTGTGGTGTTGTAGTGTGCATATTAATTTGGGGAGCAATTTTATTTATTTGATGGATACAAAAAATGGTGGTGGAATTGAAGCTTTCGTTACTCTTGTTGAAGATGAGATGAAATTGTTTCAACAAAATCAGGAGCTGCTTCACTATGCTGTGCTTAATCCTACAACAACTCTTATTTCAACTTCAAAGCTATAA 1392 0.3901 MNDASTQNKTMEIKLEKLNTILIKPSKPTPSHLQTFKVSLLDQVCPNNHINGTFFYPNNNNNNNNHNHHFSDFSNKSKILQNSLSQTLSHFYPFAGHLHDDTTIHCNDNGVFFIESQTTTTLSEILTNPNFKTLECFPPTTEEKQNMLLLLRFTLFSCGSTAITISITHRIADTNTVISFLNTWTAITSGNEIVPLPDLTVAAALFPPREIPGMSSGSVKTSDAKFTTRRFIFKASKIEELKIKIKNKFEFHPSRVEVVLALIWKCALSAASTAVSGSKTTSFKPSILFQAMNLRTRMYIPENVVGTLAWPFWVTVEEESHVALDEMVKRMRKGVMDFIENKVERFKEEGGFKVVVENLKERVEILKRNNENEGSLVIYNSSSWCKFPVLEFDFGWGKPVWCCSVHINLGSNFIYLMDTKNGGGIEAFVTLVEDEMKLFQQNQELLHYAVLNPTTTLISTSKL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0593 463 Coils Coil 1 21 - -
Tpr7g0593 463 Pfam Transferase family 14 445 - -
Tpr7g0593 463 Gene3D - 11 213 IPR023213 -
Tpr7g0593 463 Coils Coil 356 376 - -
Tpr7g0593 463 Gene3D - 223 449 IPR023213 -
Tpr7g0593 463 PANTHER F21J9.9 12 454 - -
Tpr7g0593 463 PANTHER VINORINE SYNTHASE-RELATED 12 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0593 Tpr-Chr7 5074551 5076464 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0593 13 441 Monolignol Biosynthesis Gene Families AT5G48930 22.056 1.29e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0593 - - mtr:MTR_2g007880 605.52