Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0575 ATGGAAGAAATTGAAGGTAGAAACTCTAGTGAGAGTCGACCTCCACATCCTAATCCATCTATTGCTTCTGCATTTCGTCAATGTCAACGCAATGATCCTCTCGTTTTGCCATGCAGAAAATCCCTTGTTCGTCACGCTTCTCTTCAGACTAAAATGAAGTTGTCTGCTGAGGATGTTACTGAAGATTGCCAGTCTGATTTCCTTCCAAACCTTCGTTCGGGAGGATATGCTGATATCGGGTTCCGGTCAAGTATGGAGGATGTGTATGTTTGTGTTGACAACTTTATGCAGGGTCATGGGCTCAACAAACATACTGATGGACCGAGTGCTTTCTATGGGGTGTTTGATGGACACGGTGGAAAGCAGGCAGCTGACTTTGCTTGCAATCATTTGCCGAAGTTCATTCTCGAGGATAAAGATTTCCCAGTTGATATTGAAAGGATAGTTTCTTCGGCCTTTCTGCAAACAGACAATGCATTTGCAGAAGCTTGTTCTCTCGATGCTGCCCTTGCATCTGGTACCACTGCATTGGCTACACTTATTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATTGACATGTCAAGAGACCACAAACCAGTTTGCATGAAAGAGCAGAGGCGTATCGAGGCATCCGGGGGTTATGTCTACGATGGATATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGCATGAAATGCAAAGATGGTGGACCACTAAGTGCAGAGCCTGAACTCATTACTACAAAACTTACTGCTGAGGACGAATTTCTAATCATAGGCTGCGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCGTATGTAGCAAGGATCTGGTTGACGAGGCTTTGAAGAGAAAAAGTGGAGACAATTTATCTGCTGTCGTGGTTTGCTTTCAGCAGCATCCTCCTCCGAATTTGGTAGCACCACGCTCCAGAGTTCACAGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTTTTGGATAGTTTGGAAAAATGA 1116 0.457 MEEIEGRNSSESRPPHPNPSIASAFRQCQRNDPLVLPCRKSLVRHASLQTKMKLSAEDVTEDCQSDFLPNLRSGGYADIGFRSSMEDVYVCVDNFMQGHGLNKHTDGPSAFYGVFDGHGGKQAADFACNHLPKFILEDKDFPVDIERIVSSAFLQTDNAFAEACSLDAALASGTTALATLIIGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPVCMKEQRRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKCKDGGPLSAEPELITTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAVCSKDLVDEALKRKSGDNLSAVVVCFQQHPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLEK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0575 371 PANTHER PROTEIN PHOSPHATASE 2C 56 357 IPR015655 GO:0004722|GO:0006470
Tpr7g0575 371 Gene3D - 50 339 IPR036457 -
Tpr7g0575 371 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 56 357 - -
Tpr7g0575 371 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169
Tpr7g0575 371 ProSiteProfiles PPM-type phosphatase domain profile. 72 335 IPR001932 -
Tpr7g0575 371 SUPERFAMILY PP2C-like 65 337 IPR036457 -
Tpr7g0575 371 Pfam Protein phosphatase 2C 80 327 IPR001932 -
Tpr7g0575 371 SMART PP2C_4 62 333 IPR001932 -
Tpr7g0575 371 CDD PP2Cc 72 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0575 Tpr-Chr7 4841775 4844914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0575 6 369 PP2C-type Phosphatase Gene Family AT2G25620 66.667 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Tpr7g0575 PP2C 2.4e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0575 K14803 - gmx:100804558 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0575 7 4841775 4844914 Tpr7g0575 7 4841775 4844914 ECH