Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0567 ATGAATAAATCAAAGATTAGTACTTTGTGTGCCAAAGATGAAGAGCGTCCACTTAGAATCACTAGATCAAGAGCAAAGGTTTTGGAATCTTCATCCAAAAATGAAGGAAAAAATGTTCACATAGTAGAAAATTCCAAAAGGGTTGTTGTTTGTTCTGAGAATAAAACATGTGTTGTTGATGTTCCTAAGGTTGTTCCTCACCGTAAGAGAAGGGCAGCGTTTACTGATGTAACTAACATCACCACTAAACAACATGATAAACGTGTTAAACATGTTAAAGTTCAGGCCAAAGGAGTTTACCAGAAGAAAAACACAAAGCTAACTTCAGATGTTACCGTCGAAGTTTCATCGGCACAAGAGGATGTCAAAGGGAAGTTAACTGAAGAATTGTCTGCCATAAAGATGGTAGAGTCAAATGATACTGTTGCTGCAGTAACTTTGGTTCAAGAACCAGATGAACATTGTATGTCCAACAACATAACAGAACATGTTATGACAAACACTTCACTTTCAATGGAAGGATCCGTGAATGCCGATATAAATATGATTTGTGAGAAGCTAGGAGCCTCAAATTACCTGACCATTGTGGACATTGATAAAGAGTTAAAGGATTCTGAAGTTTGGAGTGCTTATGCCCCAGATATATACAGCAAAGTTCGAGTCGCTGAGCTTGAAAAGAGACCATCAACCAATTACATGGAGAAGTTGCAGCAAGATATTTCTCCAACCATGCGTGGAATTTTGATTGATTGGCTTGTGGAGGTTACTGAGGAATATAAGTTGGTTCCTGACACTCTTTACCTTACTGTGAACCTCATCGATCGGTTTCTCTCAACAAGATTGATTCAGAAACACAGGCTCCAGTTGCTTGGTATTACTTGCATGTTCATTGCATCAAAGTACGAAGAGATCTGTGCTCCTCGAGTGGAAGAATTTTGTTTCATCACAGATAATACATACACAAAACAAGAGGTAGTGAAAATGGAGAAAGAAGTTCTAAACCTTTTGCGTTTTCAGTTATGTGTTCCTACAACCAAAACATTTCTCAGGAGATTCATCCAAGCTGCACAATCTTCTTACAAGGATCCTCGTATTGAACTTGAATTCCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGACTACAGTTTCTTACAGTTTCTACCTTCTCATGTGGCTGCTTCTGCTGTATTCCTTGCCAGATGGACTCTCAACCACTCAGAACACCCTTGGACTCCGACGCTGGAGTATCATACAAACTACAAAGCTTCTGAGCTAAAAACCGTTGTTATTGCATTGGAGGATCTGCAACTTAATACCAAAGGCTGTTCCCACCGTGCTATACGTGAGAAATATAAGCAAGAGAAGTTCAATTGTGTAGCAAAACTGTCTCCAAAACCAGTGCAATCACTGTTCCAGGTTCAAGTGTAA 1431 0.392 MNKSKISTLCAKDEERPLRITRSRAKVLESSSKNEGKNVHIVENSKRVVVCSENKTCVVDVPKVVPHRKRRAAFTDVTNITTKQHDKRVKHVKVQAKGVYQKKNTKLTSDVTVEVSSAQEDVKGKLTEELSAIKMVESNDTVAAVTLVQEPDEHCMSNNITEHVMTNTSLSMEGSVNADINMICEKLGASNYLTIVDIDKELKDSEVWSAYAPDIYSKVRVAELEKRPSTNYMEKLQQDISPTMRGILIDWLVEVTEEYKLVPDTLYLTVNLIDRFLSTRLIQKHRLQLLGITCMFIASKYEEICAPRVEEFCFITDNTYTKQEVVKMEKEVLNLLRFQLCVPTTKTFLRRFIQAAQSSYKDPRIELEFLANYLAELTLVDYSFLQFLPSHVAASAVFLARWTLNHSEHPWTPTLEYHTNYKASELKTVVIALEDLQLNTKGCSHRAIREKYKQEKFNCVAKLSPKPVQSLFQVQV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0567 476 CDD CYCLIN 244 333 IPR013763 -
Tpr7g0567 476 Pfam Cyclin, N-terminal domain 214 341 IPR006671 -
Tpr7g0567 476 Pfam Cyclin, C-terminal domain 343 465 IPR004367 -
Tpr7g0567 476 PANTHER CYCLIN-A2-4 49 472 - -
Tpr7g0567 476 Gene3D - 214 462 - -
Tpr7g0567 476 SUPERFAMILY Cyclin-like 342 465 IPR036915 -
Tpr7g0567 476 CDD CYCLIN 342 421 IPR013763 -
Tpr7g0567 476 SUPERFAMILY Cyclin-like 207 341 IPR036915 -
Tpr7g0567 476 SMART Cyclin_C_2 343 466 IPR004367 -
Tpr7g0567 476 Gene3D - 228 341 - -
Tpr7g0567 476 ProSitePatterns Cyclins signature. 245 276 IPR006671 -
Tpr7g0567 476 PIRSF Cyclin_A_B_D_E 18 475 IPR039361 -
Tpr7g0567 476 SMART cyclin_7 347 435 IPR013763 -
Tpr7g0567 476 SMART cyclin_7 250 334 IPR013763 -
Tpr7g0567 476 PANTHER CYCLINS 49 472 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0567 Tpr-Chr7 4752595 4757865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0567 3 472 Core Cell Cycle Gene Families AT5G25380 50.318 1.30e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0567 K06627 - gmx:547780 609.372