Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0561 ATGGGTGTGGATTATTATAATATATTGAAGGTAGATAAAAATGCTACAGAAGATGATTTGAAGAAAGCATATAGAAAATTGGCTATGAAATGGCACCCTGACAAGAACCCTACCAACAAAAAAGAAGCTGAAGCCAATTTCAAACAAATCTCTGAGGCTTATATGGTATTGAGTGATCCTCAGAGAAGAATTGTTTATGATCAACATGGAGAACAAGGGTTAAATGATAATAGGCCACCACAAGAAAATGAGTCATCTAGTGGAAATAATCCAAGAAGTGCAGAGGATATCTTTGCAGAATTCTTTGGAAGTAGTCCTTTGAATTTTGGATCATCTGGGCCAGGGAGGTCTCAGAGATTTCCATCTGATGGTGGTGGAGGAGGTGGATTCAATGGAGATTTTAATTTCAGAAAACATAGTGAAAGACCAAATACGCCGAAGAAACCACCACCTGTGGAGACCAAATTGCCTTGTAGTTTGGAAGAGTTGTATTCTGGTTCTACAAGGAAAATGAAGATCTCAAGGACTGCATTCGATGCTTGCGGAAGGGAAGTTAAAGAAACTGAGATATTAAGCATTGGAGTAAAGCCAGGATGGAAAAAAGGAACAAAGATTACATTCCCAGATAAAGGGAATCAGCAACTAAATCAACTTCCAGCTGATCTTGTATTTGTGATTGATGAGAAACCTCATGAATTATTCAAGAGAGATGGGAATGACTTAATTGTGAACCAAAAGATAACACTAGCAGAAGCTATTGGAGGAACTTCATTAAATATTAGAACACTTGACAAACGTAGTTTATGTGTTCCAGTTAAAAACATTGTGAGTCCTGGTTATGAGCATGTTGTTTCTAATGAAGGAATGCCAATAACAAAGGAACCTGGTCATAGGGGTAATTTAAGGATCATATTTGAGATTAAGTTCCCTACAAAATTGACACCAGAACAACGTGCTGGACTAAAGAGAGCATTGAGAGGTTGA 984 0.376 MGVDYYNILKVDKNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYMVLSDPQRRIVYDQHGEQGLNDNRPPQENESSSGNNPRSAEDIFAEFFGSSPLNFGSSGPGRSQRFPSDGGGGGGFNGDFNFRKHSERPNTPKKPPPVETKLPCSLEELYSGSTRKMKISRTAFDACGREVKETEILSIGVKPGWKKGTKITFPDKGNQQLNQLPADLVFVIDEKPHELFKRDGNDLIVNQKITLAEAIGGTSLNIRTLDKRSLCVPVKNIVSPGYEHVVSNEGMPITKEPGHRGNLRIIFEIKFPTKLTPEQRAGLKRALRG* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0561 327 CDD DnaJ_C 150 313 - -
Tpr7g0561 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Tpr7g0561 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Tpr7g0561 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Tpr7g0561 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Tpr7g0561 327 Gene3D - 151 229 - -
Tpr7g0561 327 MobiDBLite consensus disorder prediction 74 91 - -
Tpr7g0561 327 CDD DnaJ 4 59 IPR001623 -
Tpr7g0561 327 SMART dnaj_3 3 62 IPR001623 -
Tpr7g0561 327 Pfam DnaJ C terminal domain 152 310 IPR002939 -
Tpr7g0561 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 319 IPR008971 GO:0006457|GO:0051082
Tpr7g0561 327 Pfam DnaJ domain 4 67 IPR001623 -
Tpr7g0561 327 MobiDBLite consensus disorder prediction 72 91 - -
Tpr7g0561 327 Gene3D DnaJ domain 3 111 IPR036869 -
Tpr7g0561 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 151 232 IPR008971 GO:0006457|GO:0051082
Tpr7g0561 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Tpr7g0561 327 Gene3D - 230 326 - -
Tpr7g0561 327 SUPERFAMILY Chaperone J-domain 3 107 IPR036869 -
Tpr7g0561 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 327 - -
Tpr7g0561 327 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0561 Tpr-Chr7 4716662 4719173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0561 5 115 C2H2 Transcription Factor Family AT1G74250 33.043 1.64e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0561 K09510 - gmx:100796426 499.975