Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0538 ATGGCAGTGAAACCTACAAAAGCTGAGAAGAAGCAGAATTACGATGCTAAACTCTGCCAACTTCTCGATGAATTCAACCAAATCCTTGTTGTTAATGCTGACAATGTTGGATCAAATCAGTTACAGAGTATTCGTAGAGGTTTACGTGGTGACTCCATTGTTCTCATGGGGAAGAATACCATGATGAAACGTTCTGTTCGTATTCATGCTGAGAAAACCGGAAACAATGCTTTTCTTAACCTCATTCCTCTTCTTGTTGGAAATGTAGGTTTGATTTTCACAAAAGGTGACTTGAAGGAAGTTAGTGAAGAGGTTGCTAAGTACAAGGTTGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTGGTTGTTCAACCGGGCAACACAGGGCTCGACCCCTCTCAGACCTCTTTTTTCCAGGTGCTCAATATCCCAACCAAGATTAACAAGGGTACTGTTGAAATCATTACCCCTGTGGAACTTATTAAGAAAGGAGACAAGGTTGGATCTTCTGAAGCTGCATTGCTATCCAAGTTAGCCATTAGGCCCTTTTCATACGGGCTCGTTGTCCTCTCTGTTTACGATAATGGTTCAGTGTTTAGCCCCGAGGTTCTTGACCTTACTGACGATGACCTTGTTGCGAAGTTTGCTAGTGGTGTGTCAATGGTTGCTTCACTTTCATTGGCCATCTCCTACCCAACACTTGCAGCTGCCCCTCATATGTTTGTCAATGCATACAAGAATGTTCTTGCACTGGCTGTTGTTACAGAATATTCTTTCCCTGAGGCAGATAAGGTTAAGGAGTACCTCAAGGACCCAAGTAAATTTGCCGTAGCTGCAGTTGCTGCACCAGCTGCTGCTGCTTCTGGTGGTGCCCCTGCTGCTGCCAAGGAGGAGGCAAAGAAGGAAGAGCCCGAAGAAGAGTCCGATGACGACATTGGAATGGGTCTGTTTGGTGATGATTAG 972 0.4506 MAVKPTKAEKKQNYDAKLCQLLDEFNQILVVNADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSVRIHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLAIRPFSYGLVVLSVYDNGSVFSPEVLDLTDDDLVAKFASGVSMVASLSLAISYPTLAAAPHMFVNAYKNVLALAVVTEYSFPEADKVKEYLKDPSKFAVAAVAAPAAAASGGAPAAAKEEAKKEEPEEESDDDIGMGLFGDD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0538 323 Pfam 60s Acidic ribosomal protein 234 320 - -
Tpr7g0538 323 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Tpr7g0538 323 PIRSF L10E 1 321 IPR030670 GO:0042254
Tpr7g0538 323 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Tpr7g0538 323 CDD Ribosomal_P0_L10e 9 185 - -
Tpr7g0538 323 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Tpr7g0538 323 Pfam Ribosomal protein L10 7 108 IPR001790 -
Tpr7g0538 323 Gene3D - 114 185 IPR043164 -
Tpr7g0538 323 MobiDBLite consensus disorder prediction 306 323 - -
Tpr7g0538 323 MobiDBLite consensus disorder prediction 292 323 - -
Tpr7g0538 323 Gene3D - 6 209 IPR043141 -
Tpr7g0538 323 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0538 Tpr-Chr7 4580198 4582367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0538 1 321 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 81.620 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0538 K02941 - jre:108991896 513.842