Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0535 ATGTCGTTACCATCTCTAGTTAGAAGACGTTCAAGTGGAGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTCTTGCCAGCATTTGGCACTAGCCCTGATGAAGGTTACTTCAACCTAAAAAAATATACAATTGCTCCCTATGATCGAAGATATCGATTGTGGCAAACGTTCCTAGTGGCATTGGTGATGTACTCAGCATGGGCATCTTCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCTCTGTTGGTGGCTGATCTCTTTGTGGATGCATTCTTTGCATTTGATATAATCCTAACTTTCTTTGTGGCTTACTTAGATACATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTACGTCAAACATTTACACTTTCCCATGGATCTAGCCTCCACTCTTCCATTTCAGCAGATATACCGACTTCTATCAGGCAAATCACACGATAGAGGGGAAGTCTTTGGTTTTCTAAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATAAGGGTTAGCTACTCGTTAACAAGAGTCTGTAAACTATTATGCGTTACGCTATTTGCAGTGCATTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGAAAACACATGGATCGGGAAGCAGATAGAGGATTTTAAGCACAGGGGCGTCGGGTTGGGTTACACTTACTCAATGTACTGGTCTATTGTAACCCTTAGTACTGTTGGTTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGCCTTGCTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCCGAACATTTGCCATGAGGGATGCCTTCAACAAAATATTACAATATGCAAGCAAAAATGGACTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAACTGAAGTTCAAGACAGCGGAGTTACAGCAAGAAGAAGTGCTACAGGACCTACCTAAAGCAATTAGAGTCGGTATTGCTCAGCATCTTTTCCACGATGTGGTTGAAAAATCATATTTATTTAAAGGAGTCTCAGATGATTTTATATCCCAGCTGGTATCAGATATGAAAGCAGAATACTATCCATCAAAGGTTGACATTATCTTACAAAATGAGATGCCAGCAGATTTCTACATTTTGGTATCTGGATCGGTGGATGTGTTGATATACAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGACAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGGTTATACGAATCAACCATCATCATTTCAAGCAGATGGTGAAACCATATAGTGAAGATGGGAAGGCAATCATCAGTAACTTTACTCAGTTTTTGAAGGGCCTCAGAGGCGGGACGCTGGAAGAAATACCATATGTCACAGATTTCCTGAGTGACCTGCAAGACGAGCAGCAGACACAAAATGAGGGCACAAACAATGAAGATTCAAAGTATCATGAAGAAGATTCAAAGTATCATGAAGAAGATTCATATGAAGAAGGACAAACAGAAGATTTCAGTCCACTATCAAGCCTAGTCCCCATCAGAGTCAAAATCCATGGACATCACCCCAATGAAAAAATTGAAAATAGAACAACACCAAAGCTCATTATTCTACCAGATTCAGTCGAAGATCTTTTCAGCATAGCAGAGAAAAAATTTGGAAAAAGAGGAAGCAAAATTCTTATGGCCGAAGGCTCGGAAGTAGAAGATCTAAGCGCCTTAAGAGAGAATGACGAGTTATATATCATCTAA 1896 0.4008 MSLPSLVRRRSSGEIRNLASISSSLLPAFGTSPDEGYFNLKKYTIAPYDRRYRLWQTFLVALVMYSAWASSFELAFREMSIGSLLVADLFVDAFFAFDIILTFFVAYLDTSTYFLVDDHKKIAIRYVKHLHFPMDLASTLPFQQIYRLLSGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSLTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPENTWIGKQIEDFKHRGVGLGYTYSMYWSIVTLSTVGYGDLHAENTTEKVFNIFYMLFNIGLAAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRVGIAQHLFHDVVEKSYLFKGVSDDFISQLVSDMKAEYYPSKVDIILQNEMPADFYILVSGSVDVLIYKNGSEQFLFKLDPGSMTGEIGVMFNIPQPYTVRSRRLSQVIRINHHHFKQMVKPYSEDGKAIISNFTQFLKGLRGGTLEEIPYVTDFLSDLQDEQQTQNEGTNNEDSKYHEEDSKYHEEDSYEEGQTEDFSPLSSLVPIRVKIHGHHPNEKIENRTTPKLIILPDSVEDLFSIAEKKFGKRGSKILMAEGSEVEDLSALRENDELYII* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0535 631 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 54 630 - -
Tpr7g0535 631 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 3 53 - -
Tpr7g0535 631 CDD CAP_ED 373 486 IPR000595 -
Tpr7g0535 631 PRINTS EAG/ELK/ERG potassium channel family signature 88 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0535 631 PRINTS EAG/ELK/ERG potassium channel family signature 99 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0535 631 PRINTS EAG/ELK/ERG potassium channel family signature 243 260 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0535 631 PRINTS EAG/ELK/ERG potassium channel family signature 269 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0535 631 PRINTS EAG/ELK/ERG potassium channel family signature 287 296 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tpr7g0535 631 Pfam Cyclic nucleotide-binding domain 397 476 IPR000595 -
Tpr7g0535 631 Gene3D Jelly Rolls 338 495 IPR014710 -
Tpr7g0535 631 SMART cnmp_10 373 490 IPR000595 -
Tpr7g0535 631 PANTHER POTASSIUM CHANNEL AKT1 3 53 IPR045319 GO:0005249|GO:0006813
Tpr7g0535 631 PANTHER POTASSIUM CHANNEL AKT1 54 630 IPR045319 GO:0005249|GO:0006813
Tpr7g0535 631 ProSiteProfiles KHA domain profile. 563 631 IPR021789 -
Tpr7g0535 631 SUPERFAMILY Voltage-gated potassium channels 47 295 - -
Tpr7g0535 631 Pfam KHA, dimerisation domain of potassium ion channel 563 630 IPR021789 -
Tpr7g0535 631 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr7g0535 631 MobiDBLite consensus disorder prediction 527 545 - -
Tpr7g0535 631 SUPERFAMILY cAMP-binding domain-like 302 492 IPR018490 -
Tpr7g0535 631 MobiDBLite consensus disorder prediction 516 552 - -
Tpr7g0535 631 Gene3D - 53 297 - -
Tpr7g0535 631 ProSiteProfiles cAMP/cGMP binding motif profile. 373 492 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0535 Tpr-Chr7 4545998 4555467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0535 8 630 Ion Channels AT4G32650 59.171 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0535 K21867 - gmx:100794620 911.368