LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g0496	ATGGAACTCAAAAATGAGAAACTAGCCAGGTTCTCCAATGATGGAAAGCTTAATCTTGAGAAGCCAATGCAAGTTTATAAGATTCCGAAAGTTTTTGTTCCGGATGGCAAAATTAGTATTGGTGATACCGATAATGATAAGAGTAGAATGAATAATAACAAGTATCCAAGAAATCATGAACAATGGAAGAAGAGAATTCTTGATCCAGGAAGTGATATATTTCTGGAATGGAAAAGGGCTTTCTTATTTTCTTCCATACTATCACTTTTTGTTGATCCATTGTTTTTCTACCTTCCCTCAGTAGCAATAGCAACTGATAAGAGTTCATCATGCATGGTTACTGATTTGAATTTAGGAATTGTTGTTACATGTTTTCGGACATTTGCCGATGTTTTCTATTTGCTCAACATGATCATAAAGTTTAGGACAGCCTTTGTGTCACCAAGTTCTAGGGTTTTTGGGAGAGGTGAACTTGTCATGGATCCAAGGTTGATTGCGAAACGGTATTTGAGATCTGAGTTTTTCTTAGATCTTTTTGCTGCACTGCCTCTTCCTCAGATTGTGATTTGGTTTATAATGCCAGCAATTAGAAGCTCCCATGCTGATCATACCAACAATGCTCTTGTACTGATTGTTCTGATTCAATATGTCCCTAGATTGTATATGATTTTCCCATTAAGTTCTCAGATTGTTAAAGCTACCGGTGTTGTCACAAAGACGGCTTGGGCAGGAGCTGCTTACAATCTTTTACTTTACTTGTTAGCTAGTCATGTGTTGGGGGCATCATGGTATTTGTTATCAATTGAAAGGCATGCTACTTGCTGGAAATCTGAATGTAGAAATGAAAACTTACCTGTGAAATGTGTTCTTAGCTACTTGGATTGCAGTACTATAAACGATGTTGATCGCGCGAAGTGGGCGAATACTACTTCTGTGTTTGGTAACTGCAATCCTGAAAGTAGTGCTTTCAAGTATGGAATTTTTGGAATTGCAGTGGAAAATAATGTTGTCTCTTCTGTGTTTATAGAGAAGTACCTCTATTGTTTGTGGTGGGGATTGCAGAATTTGAGTTCCTATGGTCAGGGTTTGACTACAAGTACGTTTGTTTGGGAAACTGCATTTGCGATACTTATATCTATCGTAGGTCTAGTTTTGTTTGCTCACTTAATCGGTAACATGCAGACATATTTGCAATCTATTACTGTGAGACTTGAAGAGTGGAGGCTCAAGCGACGTGACACAGAAGAGTGGATGAAACATCGCCAACTCCCACAATTTCTTAGAGAGCGTGTCCGGAGATTTGTTCAGTACAAATGGCTTGCAACTCGAGGTGTTGATGAAGAAACAATCCTAAGAGGCCTCCCTACAGACCTTCGTAGAGATATCCAACGCCATCTTTGCTTAGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAACTACTTGACGCAATATGTGAGCGGTTGGTATCATCCTTGAGCACTCAAGGCACGTACATTGTCAGAGAAGGAGATCCAGTTACCGAGATGCTTTTTATCATCAGAGGGAGACTTGAAAGTTCAACCACAAATGGTGGAAGAACTGGTTTCTTTAACTCTATAACCTTGAGGCCTGGTGATTTCTGCGGAGAAGAGTTACTTGCTTGGGCATTGCTTCCAAAATCTACTCTCAACTTGCCTTCTTCTACAAGAACAGTTAAAGCACTTGTTGAAGTTGAAGCCTTTGAACTCAGAGCAGAAGATCTTAAATTTGTTGCGAACCAGTTTCGACGTCTCCACAGCAAAAAGTTGCAGCATACGTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCTGCTTGTTTTATACAGGCTGCTTGGCGCCGGTTCAAAAAGAGAGTATTGGCAAATAGCCTTAGCTTGAGGGAATACAAGTCCTTCATTAATGAACAAGTAAGAGATCAAATGGAACGTGAGGAAGAAGAACGCGGTTCTGTGACTTCAAACACTGCACAAGTAAAACAGAATCTCGGTGTCACTATACTGGCTTCAAGATTTGCTGCAAACACAAGAAAAGGTGTTCAGAAGATCAAAGATGTAGAGATGCTCAAATTGCAAAAGCCTGAAGAGCCAGATTTCTCAGTAGAGCCTGAAGATGATTAA	2151	0.4007	MELKNEKLARFSNDGKLNLEKPMQVYKIPKVFVPDGKISIGDTDNDKSRMNNNKYPRNHEQWKKRILDPGSDIFLEWKRAFLFSSILSLFVDPLFFYLPSVAIATDKSSSCMVTDLNLGIVVTCFRTFADVFYLLNMIIKFRTAFVSPSSRVFGRGELVMDPRLIAKRYLRSEFFLDLFAALPLPQIVIWFIMPAIRSSHADHTNNALVLIVLIQYVPRLYMIFPLSSQIVKATGVVTKTAWAGAAYNLLLYLLASHVLGASWYLLSIERHATCWKSECRNENLPVKCVLSYLDCSTINDVDRAKWANTTSVFGNCNPESSAFKYGIFGIAVENNVVSSVFIEKYLYCLWWGLQNLSSYGQGLTTSTFVWETAFAILISIVGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQFLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFELRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKKRVLANSLSLREYKSFINEQVRDQMEREEEERGSVTSNTAQVKQNLGVTILASRFAANTRKGVQKIKDVEMLKLQKPEEPDFSVEPEDD*	717

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g0496	716	CDD	CAP_ED	476	607	IPR000595	-
	Tpr7g0496	716	Pfam	Ion transport protein	77	403	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Tpr7g0496	716	ProSiteProfiles	cAMP/cGMP binding motif profile.	476	559	IPR000595	-
	Tpr7g0496	716	Coils	Coil	645	665	-	-
	Tpr7g0496	716	Gene3D	Jelly Rolls	474	594	IPR014710	-
	Tpr7g0496	716	Gene3D	Helix hairpin bin	404	467	-	-
	Tpr7g0496	716	Gene3D	-	94	402	-	-
	Tpr7g0496	716	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	49	712	-	-
	Tpr7g0496	716	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED	49	712	-	-
	Tpr7g0496	716	SUPERFAMILY	Voltage-gated potassium channels	70	398	-	-
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	137	146	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	254	264	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	345	362	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	371	382	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	389	398	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	PRINTS	EAG/ELK/ERG potassium channel family signature	439	446	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Tpr7g0496	716	SUPERFAMILY	cAMP-binding domain-like	406	598	IPR018490	-
	Tpr7g0496	716	SMART	cnmp_10	476	607	IPR000595	-
	Tpr7g0496	716	Pfam	Cyclic nucleotide-binding domain	499	587	IPR000595	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g0496	Tpr-Chr7	4212100	4216079	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g0496	55	712	Ion Channels	AT2G24610	71.514	0.0	987

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g0496	K05391		-	gmx:100803334	1196.03

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g0496	7	4212100	4216079	Tpr7g0496	7	4212100	4216079	ECH