Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0486 ATGGATCAACCAAAGAAACCTAACAAGATCAGAGACATCGTTAGACTTCAACAGATCCTAAAGAAATGGAGAAGAGCAGCCAATGATTCAAAAACAAAAAGCAGTAACAATAGCAGCAGCGGCAGTAGTACTACTAGTAAAAGCATAAAATTTCTGAAAAGAACACTTTCAATGTCCGAACGCGAAGGAGGAGGATCAAGTAACGCAGTTCCGAAAGGCTACCTAGCTGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGACTCATCAAGCCTTTCATATATTACTCAGAGAAGCTGAAGAAGAATTCGGGTTTGAACAAACCGGTGTCCTGAGAATTCCTTGTGAAGTATCTGTGTTTGAAAGTATCTTGGAGATGGTGGAAGGAAAAGGTAGATTTTCTATTCAGAAATGTAGTTTAGGTATTGAAAAAATGATGGGATACTGTTCCTCAAACCAGCTTGGTTATCATCATCATCCTCAAAGTCCTATGTGCAGATAG 519 0.3892 MDQPKKPNKIRDIVRLQQILKKWRRAANDSKTKSSNNSSSGSSTTSKSIKFLKRTLSMSEREGGGSSNAVPKGYLAVCVGVDLNRFVIPTEYLTHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILEMVEGKGRFSIQKCSLGIEKMMGYCSSNQLGYHHHPQSPMCR* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0486 172 MobiDBLite consensus disorder prediction 30 48 - -
Tpr7g0486 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 172 IPR003676 GO:0009733
Tpr7g0486 172 MobiDBLite consensus disorder prediction 24 48 - -
Tpr7g0486 172 PANTHER OSJNBA0060N03.10 PROTEIN 6 172 - -
Tpr7g0486 172 Pfam Auxin responsive protein 28 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0486 Tpr-Chr7 4122038 4122880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0486 3 172 Calmodulin-binding Proteins AT2G24400 52.459 9.77e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0486 K14488 - gmx:100500385 260.766