Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0473 ATGCAAAAGGAGAAGGAGGAGAGGAATATGGAATTAATGGAAGAAAGTAAGGAGGAAACCCTACCGCCGGGATTTCGATTTCATCCTACTGATGAAGAACTTATCACTTGTTATCTTATAAATAAGATATCAGATTCTAGTTTTACAGGCAAAGCAATAACTGATATAAATCTCAATAAATCTGAACCATGGGAGCTACCAGGGAAGGCAAAGATGGGAGAAAAGGAATGGTACTTTTTTAGTATGAGAGATCGTAAATATCCAACGGGTGTGAGAACCAATCGAGCAACTAATAGTGGATATTGGAAGACCACAGGGAAAGATAGAGAAATATTCAACAGTGTTACATCAGAATTGGTTGGTATGAAGAAGACTTTGGTTTTTTACAAAGGAAGAGCTCCAAGAGGAGAGAAAAGTAATTGGGTTATGCATGAATACCGCATTCACTCTAAATCAACATTTCGAACAAACAAGCAGGAAGAATGGGTGGTATGTCGGATATTCAAGAAGAGTGGTAGTGGAAAAAAGTACCCTTGTAATTCCAATTCCAACCATACAAGAGCAGGATCAATGAATCCTTGTAGCATGCAGGAAATAGGTTCTAGTAATATGGTGCAAATTCCACCACAAATGATAGAGTACTATCTTCAGGGTCTGCATGGAGATCCTTCTACTCCTCATTTCCTTTACGGACGGAACAATAGCAATTACATTAACGGTTCAAATGCGGAGGTTTTAAGAGGAGGAATAATACAATCTCATCAGATGAACTATTCTTCAATATTGCCAGCAACTACAGGAGAAGAGGGAGGAGGATTCAGCATTTCAGGTCTTAATTTGAACCTTGGATCAGGTGGAGGAGCTACCACAACAACACAACCTATTTTGCGTCCAATGCAACATTCTCAATATGCAATGGCTGATAATGTCAGTTCAATAAACATGAATATGAATTCTGTTGGTGCAGATCAGAATATTAATAATTTTGTAGGTTATAATGGTATGGAGCATTGCATGGATCTTGAAACTTACTGGCCTAATTCATACTAA 1050 0.381 MQKEKEERNMELMEESKEETLPPGFRFHPTDEELITCYLINKISDSSFTGKAITDINLNKSEPWELPGKAKMGEKEWYFFSMRDRKYPTGVRTNRATNSGYWKTTGKDREIFNSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTNKQEEWVVCRIFKKSGSGKKYPCNSNSNHTRAGSMNPCSMQEIGSSNMVQIPPQMIEYYLQGLHGDPSTPHFLYGRNNSNYINGSNAEVLRGGIIQSHQMNYSSILPATTGEEGGGFSISGLNLNLGSGGGATTTTQPILRPMQHSQYAMADNVSSINMNMNSVGADQNINNFVGYNGMEHCMDLETYWPNSY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0473 349 Pfam No apical meristem (NAM) protein 22 148 IPR003441 GO:0003677|GO:0006355
Tpr7g0473 349 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g0473 349 SUPERFAMILY NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Tpr7g0473 349 Gene3D NAC domain 30 174 IPR036093 GO:0003677|GO:0006355
Tpr7g0473 349 ProSiteProfiles NAC domain profile. 21 170 IPR003441 GO:0003677|GO:0006355
Tpr7g0473 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 335 - -
Tpr7g0473 349 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0473 Tpr-Chr7 4036974 4039322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0473 15 347 NAC Transcription Factor Family AT2G24430 51.143 1.18e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g0473 NAM 4.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0473 - - gmx:100804931 393.275