Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0470 ATGTCAATGGTATCTATCATGGAAAAGGAACGAACTCGTAAACGACCTCGTCTCGCTTGGGATGCAGCTCCACCTCCCTCAATTCCACCGGCACAGAGAATTTCGGCGGTGGTTGGTCATGAAGGAATCGAAAAAAAGTATGCTTCGCCGCCGAGGAGAGACGATGATCGCGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATATAAAATTCTCAGCAAAATGGGTGAAGGCACCTTTGGTCGAGTTTTGGAATGTTGGGATCGCCAAACAAGAGATTATGTAGCTATCAAGGTAATTAGAAGCATCAAGAAATATCGCGACGCAGCAATGATCGAGGTTGATGTACTTGAACGTCTTACGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCTTAAATTGGTTTGATTACCGGAATCACATATGCATTGTTTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTGCGCCTAATCCACACTGACCTGAAGCCTGAAAACATACTTCTTGTTTCATCTGACTATGTAAAAGTTCCTAGTTGTAAGAGGGTTTTGTCAGATGAAACACAATTTAGGTGCTTGCCCAAGTCTAGTTCTATTAAGCTGATTGATTTTGGAAGTACTGCATTTGCAAATCAGAGCCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGGTTATCTTAGGTCTAGGGTGGTCATCCCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATCGAATTATGCACGGGAGGAGCGTTATTTCAGACTCATGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCCTTACCACAGCATATGGTTCAAAGATCTAAGGGTGTCGAAAAGTATTTCAAGCGTGGATCACGACTAAGATGGCCTGAAGGAGCTGTTTCAAGAGAGAGCATAAATGCAGTGAAGAAGCTTGGTCATCTCAAGGATATTATATCAAGTCATGTCGAATCTTCAAGGTCCTTATTAACTGATTTGTTATATGGCTTATTAACATATGATCCGGCCAAACGTATTACTGCTCGCGAAGCCCTTGATCATCCTTTCTTTAGAATTCCAACTTAA 1206 0.4221 MSMVSIMEKERTRKRPRLAWDAAPPPSIPPAQRISAVVGHEGIEKKYASPPRRDDDRDGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLTKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSDYVKVPSCKRVLSDETQFRCLPKSSSIKLIDFGSTAFANQSHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPQHMVQRSKGVEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKDIISSHVESSRSLLTDLLYGLLTYDPAKRITAREALDHPFFRIPT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0470 401 PANTHER BNAA07G37640D PROTEIN 10 397 - -
Tpr7g0470 401 MobiDBLite consensus disorder prediction 1 32 - -
Tpr7g0470 401 ProSiteProfiles Protein kinase domain profile. 73 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0470 401 CDD PKc_CLK 60 397 - -
Tpr7g0470 401 Gene3D Phosphorylase Kinase; domain 1 60 153 - -
Tpr7g0470 401 SUPERFAMILY Protein kinase-like (PK-like) 60 398 IPR011009 -
Tpr7g0470 401 SMART serkin_6 73 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0470 401 Pfam Protein kinase domain 73 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0470 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Tpr7g0470 401 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 10 397 - -
Tpr7g0470 401 Gene3D Transferase(Phosphotransferase) domain 1 127 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0470 Tpr-Chr7 4020322 4024552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0470 72 398 Core Cell Cycle Gene Families AT3G48750 26.048 2.07e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tpr7g0470 Pkinase 5.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0470 K08287 - gmx:100782453 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0470 7 4020322 4024552 Tpr7g0470 7 4020322 4024552 ECH