Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0453 ATGGGAAGTGAGAGGAAACTTCCTGCTTCATCCGATACTGTACACAAAATTAGGCCGTTACATGGTAGGACTACTGGCCCTACAAGGCGCTCCACTAAAGGACAATGGACGGCTGAGGAGGATGAAGTTTTGAGGAAGGCTGTTGAGCATTTTCAAGGAAAGAATTGGAAAAAAATAGCCGAGTCTTTCCCGGATAGAACAGATGTACAATGCCTGCATAGGTGGCAAAAAGTCTTAAATCCAGAACTTATCAAAGGTCCTTGGTCTAAAGAGGAAGATGAAGCAATTATTGATTTGGTAAACAAATATGGGCCTAAAAAGTGGTCTACTATAGCACAGCATTTACCCGGACGTATCGGTAAGCAATGTCGAGAAAGGTGGCATAATCACCTTAATCCTTCTATAAACAAGGAAGCATGGACACAGGAAGAAGAGTTGGCTCTAATACATGCTCATAATATTTATGGGAATAGATGGGCAGAATTATCGAAGTTTTTGCCTGGAAGGACAGACAATGCTATAAAGAACCACTGGAATAGTTCTGTCAAAAAAAAATTGGACTCTTACTTGGCATCGGGCTTGCTTGCTCAGTTTCAAAATGTACCTCTTGTTGGAAATCTGCATCAACCTATTGCGTCATCCTCTGCTAGGTTGCAGTATAGTGTAGATGATAATGGTCCTGCGATGACTGAAGGTGAGGAAGTTTCACAGTGTAGCCAGGAATCAGCTAATGCTGGTCACTTTCCATCTGGCAGCGAGTTGAGTATTGTTGTTATACAAAATAGGGAGGAGTACAGATCAAATGAAGAATCTAATCAAGCATCATGTTCAGAGATATATTACATGTCTTTGGATGATATTACTCGCCAAGAATCATTTGAGCAGAAATATTCAAACGAACCTGGAAGCTCCTCTGCAAACGTGGATTGCCAATTTAATTTACATGCTTTGCCCAATATTTCCTCGCATGACATTGGGCAGGAACCATCACAGTTCCAAAATGATACTTTAGCTCGTAGTGAAAGTCATAACATGATAATTGTTCCATATGAATATCAGTCTTCATCTATGGACAATGATGCTAAAGGAGAACAAAATATGTCGATAACTGATGATGATTGTTGCAGATTCCTATTTTCAGAGGCAATGAGTGATGAATGCTTTTCCTCTGGAGGAGTAAATAACGTTGACTTGTCTGGACGCACTTCATCTCTTTGTCAGTCATCTTTACCATCTGGTGATAGGATGATGTATACTGCTGAAGCCAATCAGTTGGTAGGCTCTGAGGATCAAAAGTATGTCTCGAGAGAACATGATGGCTTGGTTTATGCCAATGATAATAATAGGATAGAAGATGTTGTAAAAGATGATAACTTAAAATTGGTCCCTGGAAATAGTTCTGGCTGTGGGTCAGATACTATGCAAACTTGCTATCCAACTGATGAAAAGCCAAATGTGCATCTCCAACAGGAGGAAACGGGAGGAACTTTATGTTATGAACCACCTCGTTTTCCAAGCTTGGATATACCTTTCCTGAGCTGTGATCTTGTACAATCCGGGGATATGCAGCAAGAGTTTAGTCCATTGGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTCTTACTCCTTTAAGATTGTGGGACTCACCTTCTCGCATTGATAGTCCAAATGCTTTGTTATCAAGTGCCGCTAAAACTTTCACTAGTACACCATCCATAATGAAGAAAAAGAAACGAAACAGAGACCTTTTAACTCCACTGTCAGATAGAAGAATGGAGAAAAAGCATGAGATTGACATGACATCAACTTTGATCACAAACTTTTCCCGTTTGGATGTCATGTTTGATGACAGTGAGACTCAAGGTATTGAAGATGATAAAGAAAATTGTGGACCAGCTTTTAAGGTGGGGGAGAAACGTAACTCTCAGGAGAAGATTGAGCAGCCTCCTCTTGATGCCGATTCTAAGATGAAGAATGATATTGATACTGCTGCTGAAATTGTGCAACAGCCTTCTAGAGTTTTGGTTGAACGTGATATGAACGATCCCTCGCTGTATTCTCCCAATCAAATTGGTTTGAAATCCGACATAGTTCTAAGCTTAAGTGCGAGAAGTCATAAAAAACCAGTCTCAAGACTTAATTCTCCTTGTGTTCGATTAAAGGAGCACGAAAGACTCTCAGTTTCTGTTACTTGTGTACAATCCATCTGTTCATCATCAGGCCCAGGAGAGAATATGGACGATCAAACTGGAAACGATGATAGTTTTGAAACAAATTGCATTTTTGGCGGAACACCTTTTAGGAAAAGCTTTGAATCACCTTCAGCATGGAAATCCCCCTTGTTCATCAGCACTTTTATGTCCAGCCCCAGGATTGATACTGAAATTACAATTGAGGACTATGGATGTTTCTTTAGCCCGGGCGATAAAAGCTATGATGCACTCGGATGGTTGAAACAGATTGAAGAACACACTGCAGCTCAATATGCCAATGCTCTAGAAGTCTTGGAAAATGAACCTCCTATGGCATTAACAAAAGATCCATCTGGAAGCGACCAGGGAAATAACGATCCTCATAATCAACATGCGAACCATTATCCGTCAACTTCAAATGTTTTGGTCGAGCGACGCATGCTTGACTTCAGCGAATGTGAAACTTCAGACAAGGATGACAAGGGAAAATCCTCAGCTATAAGCATTTCAAGTCCTTCTTCGTATTTGTTGAAGGGCTGTAGATAG 2742 0.4063 MGSERKLPASSDTVHKIRPLHGRTTGPTRRSTKGQWTAEEDEVLRKAVEHFQGKNWKKIAESFPDRTDVQCLHRWQKVLNPELIKGPWSKEEDEAIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIHAHNIYGNRWAELSKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLAQFQNVPLVGNLHQPIASSSARLQYSVDDNGPAMTEGEEVSQCSQESANAGHFPSGSELSIVVIQNREEYRSNEESNQASCSEIYYMSLDDITRQESFEQKYSNEPGSSSANVDCQFNLHALPNISSHDIGQEPSQFQNDTLARSESHNMIIVPYEYQSSSMDNDAKGEQNMSITDDDCCRFLFSEAMSDECFSSGGVNNVDLSGRTSSLCQSSLPSGDRMMYTAEANQLVGSEDQKYVSREHDGLVYANDNNRIEDVVKDDNLKLVPGNSSGCGSDTMQTCYPTDEKPNVHLQQEETGGTLCYEPPRFPSLDIPFLSCDLVQSGDMQQEFSPLGIRQFMMSSMNCLTPLRLWDSPSRIDSPNALLSSAAKTFTSTPSIMKKKKRNRDLLTPLSDRRMEKKHEIDMTSTLITNFSRLDVMFDDSETQGIEDDKENCGPAFKVGEKRNSQEKIEQPPLDADSKMKNDIDTAAEIVQQPSRVLVERDMNDPSLYSPNQIGLKSDIVLSLSARSHKKPVSRLNSPCVRLKEHERLSVSVTCVQSICSSSGPGENMDDQTGNDDSFETNCIFGGTPFRKSFESPSAWKSPLFISTFMSSPRIDTEITIEDYGCFFSPGDKSYDALGWLKQIEEHTAAQYANALEVLENEPPMALTKDPSGSDQGNNDPHNQHANHYPSTSNVLVERRMLDFSECETSDKDDKGKSSAISISSPSSYLLKGCR* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0453 913 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 186 IPR017930 -
Tpr7g0453 913 SMART sant 32 81 IPR001005 -
Tpr7g0453 913 SMART sant 84 133 IPR001005 -
Tpr7g0453 913 SMART sant 136 184 IPR001005 -
Tpr7g0453 913 Gene3D - 26 84 - -
Tpr7g0453 913 SUPERFAMILY Homeodomain-like 34 89 IPR009057 -
Tpr7g0453 913 SUPERFAMILY Homeodomain-like 82 178 IPR009057 -
Tpr7g0453 913 ProSiteProfiles Myb-like domain profile. 28 79 IPR001005 -
Tpr7g0453 913 MobiDBLite consensus disorder prediction 1 37 - -
Tpr7g0453 913 Coils Coil 820 840 - -
Tpr7g0453 913 PANTHER MYB PROTEIN-RELATED 10 410 - -
Tpr7g0453 913 PANTHER MYB PROTEIN-RELATED 503 912 - -
Tpr7g0453 913 Gene3D - 85 136 - -
Tpr7g0453 913 Gene3D - 138 197 - -
Tpr7g0453 913 CDD SANT 36 79 IPR001005 -
Tpr7g0453 913 Pfam Myb-like DNA-binding domain 137 179 IPR001005 -
Tpr7g0453 913 Pfam Myb-like DNA-binding domain 33 79 IPR001005 -
Tpr7g0453 913 Pfam Myb-like DNA-binding domain 85 131 IPR001005 -
Tpr7g0453 913 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 79 IPR017930 -
Tpr7g0453 913 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 135 IPR017930 -
Tpr7g0453 913 ProSiteProfiles Myb-like domain profile. 80 131 IPR001005 -
Tpr7g0453 913 MobiDBLite consensus disorder prediction 1 19 - -
Tpr7g0453 913 MobiDBLite consensus disorder prediction 849 869 - -
Tpr7g0453 913 CDD SANT 139 179 IPR001005 -
Tpr7g0453 913 MobiDBLite consensus disorder prediction 847 869 - -
Tpr7g0453 913 PANTHER TRANSCRIPTION REPRESSOR MYB5 10 410 - -
Tpr7g0453 913 PANTHER TRANSCRIPTION REPRESSOR MYB5 503 912 - -
Tpr7g0453 913 CDD SANT 87 131 IPR001005 -
Tpr7g0453 913 ProSiteProfiles Myb-like domain profile. 132 182 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0453 Tpr-Chr7 3840059 3846384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0453 21 913 MYB Transcription Factor Family AT4G32730 42.671 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g0453 Myb_DNA-binding 6.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0453 - K09420 cam:101506533 1515.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0453 7 3840059 3846384 Tpr7g0453 7 3840059 3846384 ECH